Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0491 ATGGTTTTCACCTCCATCCCTGCTTATCTTGATCCAGCCAACTGGCACCAACAACAGCAACCAAATCATCACACCGGCAGCGTTGCCGTCGGCAGCAGTGGCGGGTCTCAACATCAGAATCAGCAGCAGCATCTTCTTTCGCCGCCGCAACCTCCGCCTCTGCCGCAGCCCACGCAACCTCAGGGAGTGGGCAGCTCGGGCTCGATCAGGCCAGGATCGATGGCCGATCGAGCCCGAATGGCGAACATACCGATGCCGGAGACCGCCCTGAAATGCCCACGGTGCGAATCCACAAACACCAAATTCTGCTACTTCAACAACTACAGCCTCTCTCAGCCACGACACTTTTGCAAGACGTGTCGGCGGTACTGGACCCGGGGTGGCGCGCTGAGGAATGTGCCGGTTGGAGGGGGATGCCGGAGGAACAAGAGATCAAGCAAAGGAAGCAGCAGATCGAAGTCGCCGGTGAGCTCAGATCGTCAAACCGGGAGTGCTAGCTCGACGAACTCAGCCTCCTCCACCGGCGACATAGTAGGCCTTGCAGCACCTCACGCGCCACCATTGAGGTTTATGTCTCCATTACTCAATGATTACGCTGCTGGTGGAGAGTTGGGAGGGTTAAACTATGGCCTAAATTATAATACAATTTCAGCATCAATGGGAGGTGCGGGAGGAGTAGGTGACTTAAATTTCAGTGCTTTAAGTGGTGGAGGAAGCGGCAGCACCGGCGCTGGCAGTGCCGCGGCCGGGTCTATCTTATTTGCAGCGGGTTTGGAGCAATGGCGGATGCCACAAGCACAGCAATTTCCCTTCTTGGCCGGGTTGGAAGCTCCAGCCGGTGGGTTGTACCCGTTTGAAGGCGGTGCCGGTGCAGCCGAGGCACCGGGATATGGCGGCGGGAGGGGGAAGTTGTCAACTTCCGGGGTGATAACTCAGCTGGCTTCAGTGAAAATGGAAGATCACAATCAAGAGCTGAATTTGTCAAGGCAATTCATGGGACTTAATGAGCAATATTGGAGTAATATTGGAGGTGGAAGTGGTACTACTTCTGCTTGGACTGATCTTTCTGGATTTAGCTCTTCTTCCGCTACTAGTAATAACCCACTATAG 1110 0.5477 MVFTSIPAYLDPANWHQQQQPNHHTGSVAVGSSGGSQHQNQQQHLLSPPQPPPLPQPTQPQGVGSSGSIRPGSMADRARMANIPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSSKGSSRSKSPVSSDRQTGSASSTNSASSTGDIVGLAAPHAPPLRFMSPLLNDYAAGGELGGLNYGLNYNTISASMGGAGGVGDLNFSALSGGGSGSTGAGSAAAGSILFAAGLEQWRMPQAQQFPFLAGLEAPAGGLYPFEGGAGAAEAPGYGGGRGKLSTSGVITQLASVKMEDHNQELNLSRQFMGLNEQYWSNIGGGSGTTSAWTDLSGFSSSSATSNNPL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0491 369 ProSitePatterns Zinc finger Dof-type signature. 92 128 IPR003851 GO:0003677|GO:0006355
Bisa06g0491 369 MobiDBLite consensus disorder prediction 149 176 - -
Bisa06g0491 369 MobiDBLite consensus disorder prediction 15 45 - -
Bisa06g0491 369 Pfam Dof domain, zinc finger 89 144 IPR003851 GO:0003677|GO:0006355
Bisa06g0491 369 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 183 IPR045174 GO:0003700|GO:0006355
Bisa06g0491 369 MobiDBLite consensus disorder prediction 15 73 - -
Bisa06g0491 369 ProSiteProfiles Zinc finger Dof-type profile. 90 144 IPR003851 GO:0003677|GO:0006355
Bisa06g0491 369 MobiDBLite consensus disorder prediction 134 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0491 Bisa-ChrBisa06 12387670 12388967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0491 1 344 C2C2-Dof Transcription Factor Family AT5G02460 39.175 4.43e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa06g0491 zf-Dof 2.8e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0396 10 8148119 8149516 Bisa06g0491 06 12387670 12388967 CCT