Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0460 ATGTCCAGAGTAGGTTCATCAAGATGGAGCCCAACCCCAGAGCAGTTGATGATTCTGGAGGAACTGTATAGGAGTGGGACTAGAACTCCCACTGCTTCCCAAATCCAACAGATTACAGCTCACCTTTGTTTATATGGTAGGATTGAAGGGAAGAATGTGTTTTATTGGTTTCAGAACCACAAGGCTAGGGATAGGCAGAAGCTCAGGAGGAAACTTAACAGACAACTTCAGCTACAACAACAACAACAACAACAGCAACAAACGCAAGTCCATCATTACCAACTGAATATTCAGGATAAGAGCCATCACTGTTTCTTTTGTGGCTTTGATTCTTCTTGTGGCTATTCTTCTACACAACAGATTTCTTTTTATAACCCTGATATCTTGCTTTCTCGGGGAGAAGCTGCAGATACATCAGAGAAAACAGAGACGTCAATCTGCAACTATGGTTGGACCACTCGGCCTCTCAAGACTCTTGACCTCTTTCCAACCACAGCCACCAAACTCAAAGAAGACTGCACCGCATCCTCCAAGCAGCTTTATCAATCTATGTCCACTAGCCTGTGA 567 0.4392 MSRVGSSRWSPTPEQLMILEELYRSGTRTPTASQIQQITAHLCLYGRIEGKNVFYWFQNHKARDRQKLRRKLNRQLQLQQQQQQQQQTQVHHYQLNIQDKSHHCFFCGFDSSCGYSSTQQISFYNPDILLSRGEAADTSEKTETSICNYGWTTRPLKTLDLFPTTATKLKEDCTASSKQLYQSMSTSL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0460 188 SMART HOX_1 4 71 IPR001356 GO:0003677
Bisa06g0460 188 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 179 IPR044555 GO:0003700|GO:0099402
Bisa06g0460 188 Coils Coil 65 89 - -
Bisa06g0460 188 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Bisa06g0460 188 CDD homeodomain 8 67 IPR001356 GO:0003677
Bisa06g0460 188 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Bisa06g0460 188 FunFam WUSCHEL-related homeobox 4 6 73 - -
Bisa06g0460 188 SUPERFAMILY Homeodomain-like 5 69 IPR009057 -
Bisa06g0460 188 Gene3D - 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0460 Bisa-ChrBisa06 11250625 11251998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0460 1 74 Wox Gene Family AT2G28610 82.432 8.60e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa06g0460 Homeodomain 5.4e-19 CL0123