Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0451 ATGTTTCATCGGATTTCCCAAATCTGCATTCACCGTGACGTGCGATTGTGCGAAGGAGGGGGGAAAAACTGCTGTGCTGTGACCTGTGACCTCTCGGCCTTCCCTCTGTATCAAATTTCTGCTCCCGTCCTCTGTGCTTCTTCACTTCTTCTGGAGAAAGGAATGGATGAGGGAAAGCATAAATCTAGGAAGGAAGATTCTGAGGGGAAGGAAGAGGATTCCAAGAGGAGTCGTCGTGATAAAGACCGTGAGAGAACTGGAGAAAGAGGTAAGGATAGAAGTGAAGGGAGGCACAAGGATAGGGAGAAGAGGGATCGTGAGAGCCGACGTCACGAGAGAGAGAGAAGTTGTGATTCTGGTGAAAGATATGATAGAGAAAGAGAGAAGCACAAAGAAAAGGATAAGGATAGAACTCGAGTTCAAGATGAAGAAAGGGAAAGGGCTCGAGATAAGAAAAGGGAAAGAGACAGGGATGATAGGGAAAGGGAGAGGAGAGACAGGACAAGGGAGAAGGAAAGGGAGAAGGAAAGAGAAAGGGAAAGGGATAAGAGAGAGCGTGAGAGAGAGAGGGAAGTGGAAAGAGAAAGGGGGAGGAGAGTACGAGAGAGAGAAAAGCGTAGGGAAGTTGATAGTGAGTATAGTGATGATGATTCTAGGGAAAGAGATAGAAAGCGGCACAAGAAAATGGATGATGATCACAAGGGGAGAGAGCTTGAAAAGAGCGTCAACAAGTCAAATAGGAAAACTGAGAATATTGAGGGCAGCCCGAGGAAAAAGGGTGGCAATGATTACTCAGACACCAAAGAAGGTAACCCCACCCGTGAGGAGGAGATACAGGATGAACATAGGAGATTGGATGAAGAAATGGAAAAGAGGAGGAGGAGAGTCCAGGAGTGGCAAGAGCTGAGGAGGAAAAGGGAAGAAGCTGAGAGAGAAAAGCATGGTGAAGCAAGGGTTGATGAACCCAAGTCTGGAAAAGCTTGGACACTTGAAGGGGAATCTGATGATGAAGAAGGCACCACTACAGGGAAGCCAGATACAGCTATGAATGTAGATGAAGATGACAGACCTTCTGATAAAGAACCTATGGATTTGATGGTGGCAGATGTTGGTAATAGAACTGTTGCATCTGATTCACAGGAAGAAGCTGCTGGTTCTCATGCAGATGAGGAAATTGATCCATTGGATGCTTTCATGAGTTCTATGGTTCTTCCTGAAGTTGAAAAGCTGAACTCTGCTGTGACTCCTTCAAATGATGATAGGACTGCTGACTTAAAGCCCAGAGATAAAGGGGAAGAGCAAAGTTATGGAGGACGCCCAAGGAAAGGTTCAAATAAATCAATTGGGAGAATAATTCCTGGTGAAGAGTCTGACTCAGACTATGCAGACCTTGAAATAGAAGGTGATCCATTAGATGAAGATGATGATGAGTTCATGAAAAGAGTAAAGAAGACAAAAGCTGAGAAACTTTCTGTTGTTGACCACTCAAAGATTGATTATAAACCGTTCAAGAAAAATTTTTATATTGAAGCAAAGGAGATTGCAAAGATGACTCTTGAAGAAGTTGCAGCATACAGGAAGCAGCTGGAGTTGAAGATACACGGAAAGGATGTGCCAAAGCCTGTAAAATCATGGAATCAGATTGGACTTACCAGCAAAATTTTGGAGACAATAAAGAAGCTTAACTATGATAAACCAATGTCTATTCAAGCTCAGGCCCTTCCTATAATTATGAGTGGTAGAGATTGCATAGGAGTTGCTAAAACTGGGTCAGGAAAAACACTTGCTTTTGTTCTGCCAATGCTGAGGCACATCAAGGATCAGCCGCCAGTTGTTGCAGGAGATGGACCTATTGGGCTTATAATGGCTCCAACAAGGGAGCTTGTTCAACAGATTCACAGTGATATAAAGAAATTTGCAAAGGTACTGGGTCTTAGGTGTGTGCCTGTCTACGGAGGTTCTGGTGTTGCCCAACAAATCAGTGAGTTGAAACGTGGCACCGAGATTGTGGTTTGTACTCCAGGTAGGATGATTGATATACTATGCACCAGCAGTGGAAAGATAACTAACCTGCGTAGAGTCACTTATCTGGTCATGGATGAGGCTGATCGTATGTTTGACATGGGCTTTGAACCTCAAATCACTAGAATTGTTCAGAATATTCGACCAGATCGTCAGACCGTTCTCTTTTCTGCTACTTTCCCCCGTCAGGTTGAAATTCTGGCTCGCAAGGTTTTGAACAAACCTGTTGAAATACAAGTTGGTGGAAGGAGTGTTGTGAATAAGGACATTACACAGCTAGTTGAGGTGAGGCCAGAAAATGAGAGGTTCTTTAGGCTCTTGGAATTATTAGGGGAATGGTATGAGAAGGGAAAGATATTGATATTTGTCCACTCACAGGAAAAATGTGATGCTTTGTTCAAGGATTTGCTTAGACATGGTTATCCATGCCTTTCTCTTCATGGGGCTAAGGATCAGACAGACCGGGAATCCACTATTTCTGACTTTAAAAGCAATGTCTGCAACTTGTTAATTGCAACAAGTGTTGCTGCCAGGGGATTAGATGTCAAGGAGCTTGAATTGGTAATCAATTTTGATGTTCCAAACCACTATGAAGATTATGTACATCGTGTTGGACGCACAGGCCGAGCTGGCCGGAAGGGTTGTGCTATCACATTTATTTCAGAGGAAGATGCAAGATATGCACCAGATCTGGTGAAAGCCTTGGAGCTATCCGAGCAGATAGTTCCTAATGACCTGAAAGCTCTTGGTGATGGATTTATGGCAAAAGTTAATCAAGGACTTGAACAAGCTCATGGGACTGGTTATGGAGGCAGTGGCTTTAAATTTAATGAAGAGGAAGATGAAGTCAGGAGAGCAGCAAAGAAAGCACAAGCCAAAGAATATGGGTTTGAAGAAGACAAGTCAGATTCTGAAGATGAAGATGAAGGTATTAGGAAGGCAGGAGGTGACATTGCACAGCATCCTGCTCTTGCTCAGATTCTTGCTGCCACAAAAGCAAATTCACCTGCAATTCCTACTTCTTCCCAGCTAATTTCAAATGGTGGACTACCTGTTTCCTTGCCAGGGGTTCTTGGTCTCCAGAGTGCAGCAGTCATGCCTGGGACAGGGCTGCCTATTGTTCCAAATGATGGGGCTGCTCGTGCAGCACTAGCTGCTATGAATCTGCAAAATAAATTAGCAAAGATTGCTGGTGCAATGGCAGAACATTATGAAGCTGAGTTGGAGATAAATGATTTCCCGCAGAATGCTCGGTGGAAAGTCACACACAAGGAAACTCTAGGCCCAGTTTCTGACTGGACTGGAGCTGCTATTACCACCAGGGGTCAGTATTTCCCACCCGGTAAGGTCCCAGGACCTGGGGAACGCAAACTCTACTTGTTCATTGAGGGTCCCAGTGAACAGTCTGTTAAGAGAGCAAAAGCAGAATTGAAGCGTGTATTGGAAGACATCACAAATCAGACTTTGCAACTTCCTGGAGGTTCTCAGCCAGGCAAATATTCTGTTGTATAA 3534 0.4423 MFHRISQICIHRDVRLCEGGGKNCCAVTCDLSAFPLYQISAPVLCASSLLLEKGMDEGKHKSRKEDSEGKEEDSKRSRRDKDRERTGERGKDRSEGRHKDREKRDRESRRHERERSCDSGERYDREREKHKEKDKDRTRVQDEERERARDKKRERDRDDRERERRDRTREKEREKERERERDKREREREREVERERGRRVREREKRREVDSEYSDDDSRERDRKRHKKMDDDHKGRELEKSVNKSNRKTENIEGSPRKKGGNDYSDTKEGNPTREEEIQDEHRRLDEEMEKRRRRVQEWQELRRKREEAEREKHGEARVDEPKSGKAWTLEGESDDEEGTTTGKPDTAMNVDEDDRPSDKEPMDLMVADVGNRTVASDSQEEAAGSHADEEIDPLDAFMSSMVLPEVEKLNSAVTPSNDDRTADLKPRDKGEEQSYGGRPRKGSNKSIGRIIPGEESDSDYADLEIEGDPLDEDDDEFMKRVKKTKAEKLSVVDHSKIDYKPFKKNFYIEAKEIAKMTLEEVAAYRKQLELKIHGKDVPKPVKSWNQIGLTSKILETIKKLNYDKPMSIQAQALPIIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGLRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPENERFFRLLELLGEWYEKGKILIFVHSQEKCDALFKDLLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPNDLKALGDGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDIAQHPALAQILAATKANSPAIPTSSQLISNGGLPVSLPGVLGLQSAAVMPGTGLPIVPNDGAARAALAAMNLQNKLAKIAGAMAEHYEAELEINDFPQNARWKVTHKETLGPVSDWTGAAITTRGQYFPPGKVPGPGERKLYLFIEGPSEQSVKRAKAELKRVLEDITNQTLQLPGGSQPGKYSVV 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0451 1177 PANTHER RNA HELICASE 489 965 - -
Bisa06g0451 1177 Gene3D - 753 925 IPR027417 -
Bisa06g0451 1177 Gene3D - 495 752 IPR027417 -
Bisa06g0451 1177 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 574 752 IPR014001 -
Bisa06g0451 1177 Pfam Helicase conserved C-terminal domain 779 885 IPR001650 -
Bisa06g0451 1177 Coils Coil 275 312 - -
Bisa06g0451 1177 CDD SF2_C_DEAD 764 894 - -
Bisa06g0451 1177 SMART ultradead3 562 767 IPR014001 -
Bisa06g0451 1177 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 763 924 IPR001650 -
Bisa06g0451 1177 MobiDBLite consensus disorder prediction 959 984 - -
Bisa06g0451 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 901 IPR027417 -
Bisa06g0451 1177 MobiDBLite consensus disorder prediction 56 462 - -
Bisa06g0451 1177 Pfam DEAD/DEAH box helicase 568 739 IPR011545 GO:0003676|GO:0005524
Bisa06g0451 1177 CDD DEADc_DDX46 532 753 - -
Bisa06g0451 1177 MobiDBLite consensus disorder prediction 421 439 - -
Bisa06g0451 1177 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 698 706 IPR000629 -
Bisa06g0451 1177 SMART helicmild6 804 885 IPR001650 -
Bisa06g0451 1177 FunFam probable ATP-dependent RNA helicase DDX17 505 755 - -
Bisa06g0451 1177 Coils Coil 165 195 - -
Bisa06g0451 1177 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 543 571 IPR014014 GO:0003724
Bisa06g0451 1177 MobiDBLite consensus disorder prediction 56 363 - -
Bisa06g0451 1177 MobiDBLite consensus disorder prediction 959 973 - -
Bisa06g0451 1177 CDD KH-I_AtRH42_like 1074 1176 - -
Bisa06g0451 1177 Coils Coil 1141 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0451 Bisa-ChrBisa06 11139710 11145654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0451 530 905 Eukaryotic Initiation Factors Gene Family AT3G19760 32.895 1.59e-59 208