Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0371 ATGGAACAAGGTCATCATCATCAGTTTTGGATGTGGACAAAGAGGAAGTACTCCATGAGCTCTTCTAACAATACTCTCTCTGCTTCACCAACAAAACCCTCTTCTAATTCCTATGATGACTCTTCATGGGAAGAGCAAGCTTTTGCTGAGGATGCTTCTGGGCCTCTTGGTGGGTGCATATGGCCTCCAAGGTCATACACTTGCAGCTTCTGCAGAAGAGAGTTCAGGTCAGCTCAGGCTCTAGGAGGCCACATGAATGTTCATAGAAGGGATAGGGCAAGACTCAAGCAGCCTTCAAGCCCTCAAAATCATGAACTTCAAATCCAAAATCAAAATCCTCCTTCTTTTACAGGTTTTTTATACCCATATGGTAATAGTCTTACTGCTAGTGCTAACCCTAATTCTGTTCTTGTTGCTTCTTCACCTTCTAATAAGGCTTTGACTCCAATTCCATCATCAACTTTTAATTCTTCTTCTGTTGTTCTTCCTCCACAAGGACACAAGGTTGCTTCTAATAATTATTCCTCTCTCTATTCTTCTTCTTCTAAATTTGATTGGTCGAAAGCCCATGAAGCTCATGGGAATATCACGAAGGTATTGGATTGTGGATGTGAGCATAATGGAAAAGCTGATGTGGCTTTTAGCTTGAATTTGGTTGTGTGTAGAGGTCATCATCACTCATCTGTGGAGTTTGAACCAAAAGAAGAAGAACAAGAACAAGAAGAAGAAGAGGGGGAGGAAGAAGAAGAAGAAGAAGCAGAAGCTATTATTGATTGCAAGAAGAGGAGAATTGATAATAAAGAAGATCACTCATCAATTCTTCCATTCTTCCCAAATTCAAATTCTTCAGTTGAATTTAGCCCTAGCTCCATGGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCAGAGCAAGCACAAGGTACAGTAG 927 0.411 MEQGHHHQFWMWTKRKYSMSSSNNTLSASPTKPSSNSYDDSSWEEQAFAEDASGPLGGCIWPPRSYTCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPQNHELQIQNQNPPSFTGFLYPYGNSLTASANPNSVLVASSPSNKALTPIPSSTFNSSSVVLPPQGHKVASNNYSSLYSSSSKFDWSKAHEAHGNITKVLDCGCEHNGKADVAFSLNLVVCRGHHHSSVEFEPKEEEQEQEEEEGEEEEEEEAEAIIDCKKRRIDNKEDHSSILPFFPNSNSSVEFSPSSMEELDLELRLGQSKHKVQ 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0371 308 MobiDBLite consensus disorder prediction 82 111 - -
Bisa06g0371 308 PANTHER OS07G0101800 PROTEIN 37 303 - -
Bisa06g0371 308 Coils Coil 231 256 - -
Bisa06g0371 308 MobiDBLite consensus disorder prediction 21 44 - -
Bisa06g0371 308 MobiDBLite consensus disorder prediction 273 289 - -
Bisa06g0371 308 MobiDBLite consensus disorder prediction 255 270 - -
Bisa06g0371 308 SMART c2h2final6 66 88 IPR013087 -
Bisa06g0371 308 Pfam C2H2-type zinc finger 66 90 - -
Bisa06g0371 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Bisa06g0371 308 MobiDBLite consensus disorder prediction 234 254 - -
Bisa06g0371 308 MobiDBLite consensus disorder prediction 227 292 - -
Bisa06g0371 308 Gene3D Classic Zinc Finger 63 116 - -
Bisa06g0371 308 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Bisa06g0371 308 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Bisa06g0371 308 MobiDBLite consensus disorder prediction 21 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0371 Bisa-ChrBisa06 9247820 9248746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0371 40 97 C2H2 Transcription Factor Family AT2G37740 81.034 9.44e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa06g0371 zf-C2H2_6 5.7e-06 CL0361