Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0348 ATGGCGGAGGGTTTCGAGCCTTACCATGTTCCTCAGCAAAGTAGAAGAGACAAGCTGAGGGTTCTGTCTCATCACAACCAAACGACCCTCGTTGATTCCTCCCCTAACCTCCCTCCTGGTTTAGTCCCTCTATACGACCCTTCTCTGATTTCCTCTGATTTGCTCTCAAACCCCAACTGCGTTGTCAAGGAAGAAGCCTCACAAAATTTAATGGGATTTTCTTCGTCTTCCTTGGATCCCCAATCATCGTCGTCTTTGCCCATAAACCTTGGCACGATTCAAGTTATTAACAACAATCCATTCCTTTACCCACCCCAAAACCTGCAGAGCCTTCGGGAATTCGACCATTCCTTCAATGGTAGTGAAATAATGGTGTACAAGCCAGAACCCTTGTCTTTGTCTCTATCTTCCCACAATACCAACCAAAATAGTCTTCCCCTCGAGTTGAATCTTCAGCGATATGGGTCTCTTATCTATGACAGACCCATATCAGGTTTAGTAGGAGGAAATAGCAGCAGTGCTGCTTCTGCTTCGAATGAAGCTTCGAGAAGCTCAATCCCTCTTGGGCCATTTACGGGTTACGCTTCGGTGTTGAAGGGATCGAGGTTTTTAAAGCCTGCACAGCAGTTATTGGAAGAGCTTTGTGATGTTGGTGGTTGTGGACTTTACACCGAGAAGATAACGCCAGATGCTTCGTTGATGGAACCTCCTTCGGAGAGTTTAAGTGGTAGTGGAATCGGTGACAATCCGCTCGTCGATGGGGGTGAGAGTCGGAAGAAGAAGTCCAAGCTTCTTACTATGCTTGATGAGGTATTCAGGAGGTACAGGCAGTACTATCAACAGATGCAGGCTGTGATAACTTCCTTTGAGTATGTAGCCGGCCTCGAAAATGCAGCGCCATATGCCAGCTTGGCTATAAAATCCATGTCCAAGCATTTTAGGTGCTTGAAGAATGCAATTGCCGACCAGCTCCATTTCACCACCAAGGCTCATTTGAACATGAGCAACTTGAAGGATGAATCTCTAATTCTTGCCAACAATGATAAAGGCCCTTATAGCCAAAGACCTGTTCAGAACCCAGGAATGCTTGATCACCAGCCAGTTTGGCGACCGCAACGAGGACTTCCCGAACGAGCTGTAACTGTTCTCAGGGCATGGTTGTTTGAACACTTTCTGCACCCTTATCCTACTGATACTGACAAGCTGTTGTTAGCTAAACAAACCGGTCTGTCTCGAAGTCAGGTGTCAAATTGGTTTATTAATGCCAGAGTAAGGCTCTGGAAGCCGATGGTGGAAGAAATACATACGCTAGAAACACGACAAGCTCAAAAAAATCAGCATAGGGAAGAAAATAACAGGGACTGTCCTAGAGATCATTTAACTTCAGATAACTCACTTGTTTCAGAGAATCCATCTACCTCCACTAACAAATTCCTGGATGTCCCTTATAAACGCACTAGAAATGAACTTGCTAATGTACCGGTGAGGAGTCAGGAACAACAGCTAAATCTGCCATACACAGGCAATCAGAATCAGAATCAGCCAGTAGATGTGGGAAGGAGCATGGGAGCTTCTGGCAGTAACAATGGTGTCTCACTGACACTAGGTCTTCATCAAAATCATGGGATTGGGTTATCTGAATCCTTTCCCATGAGTTCCACGCATCGTTTTGGTGTTTCCCTCGAACCCAGTAATGAAGGCTATGTATTGAGTGGTTTTGAATCACAAAACCAACATTTTGGAAGAGATGTTATGGGAGGACAGCTATTACATGACTTTGTGGGCTGA 1788 0.4536 MAEGFEPYHVPQQSRRDKLRVLSHHNQTTLVDSSPNLPPGLVPLYDPSLISSDLLSNPNCVVKEEASQNLMGFSSSSLDPQSSSSLPINLGTIQVINNNPFLYPPQNLQSLREFDHSFNGSEIMVYKPEPLSLSLSSHNTNQNSLPLELNLQRYGSLIYDRPISGLVGGNSSSAASASNEASRSSIPLGPFTGYASVLKGSRFLKPAQQLLEELCDVGGCGLYTEKITPDASLMEPPSESLSGSGIGDNPLVDGGESRKKKSKLLTMLDEVFRRYRQYYQQMQAVITSFEYVAGLENAAPYASLAIKSMSKHFRCLKNAIADQLHFTTKAHLNMSNLKDESLILANNDKGPYSQRPVQNPGMLDHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLLLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHTLETRQAQKNQHREENNRDCPRDHLTSDNSLVSENPSTSTNKFLDVPYKRTRNELANVPVRSQEQQLNLPYTGNQNQNQPVDVGRSMGASGSNNGVSLTLGLHQNHGIGLSESFPMSSTHRFGVSLEPSNEGYVLSGFESQNQHFGRDVMGGQLLHDFVG 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0348 595 MobiDBLite consensus disorder prediction 439 460 - -
Bisa06g0348 595 Gene3D - 372 434 - -
Bisa06g0348 595 MobiDBLite consensus disorder prediction 461 481 - -
Bisa06g0348 595 MobiDBLite consensus disorder prediction 233 259 - -
Bisa06g0348 595 SMART prehox3 192 322 IPR006563 -
Bisa06g0348 595 SUPERFAMILY Homeodomain-like 371 435 IPR009057 -
Bisa06g0348 595 SMART HOX_1 369 433 IPR001356 GO:0003677
Bisa06g0348 595 FunFam BEL1-like homeodomain protein 9 372 434 - -
Bisa06g0348 595 Pfam Associated with HOX 197 321 IPR006563 -
Bisa06g0348 595 MobiDBLite consensus disorder prediction 491 515 - -
Bisa06g0348 595 CDD homeodomain 369 430 IPR001356 GO:0003677
Bisa06g0348 595 ProSiteProfiles 'Homeobox' domain profile. 366 429 IPR001356 GO:0003677
Bisa06g0348 595 Pfam Homeobox KN domain 386 425 IPR008422 GO:0003677|GO:0006355
Bisa06g0348 595 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 84 452 - -
Bisa06g0348 595 MobiDBLite consensus disorder prediction 439 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0348 Bisa-ChrBisa06 8832372 8839135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0348 115 595 Homeobox Transcription Factor Family AT5G02030 47.719 7.11e-120 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa06g0348 POX 2.5e-39 No_clan