Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0326 ATGTCGACCATACAGATGTCCCATGTAGATTTAGAGCAAGGAAATCACCGGCGTTCGGTGGCCGGAAGTGACGTCAGCGCCGACGGGAGCGTATGCTTCTCCGACGCGGAGGATGGGTCGTGCTATTCTCATTTCTATTCTACAAACGGTGGCTCATATGACGATTACAGCTTCGATTGCGTTTCTGATTCTGAGGTTAGGAGTGTTCCTGATTCTAGGAGGGCTTCTTCTGTGAGTGACTGTTCGGTGGAAGTGGAAATTGAAACTGGGATTCCTGAGATTAAGGTGCATTTGTGCAAAGTAGAGAGAAATTGTAGGATTTGTCACTTGGGTTTGGAGAGTGATGGTCATGAAGACGAGTCTGGGGTTCCTATTGAATTGGGTTGCTCTTGCAAGGATGATTTAGCTATTGCTCACAAGCACTGTGCTGAGGCCTGGTTCAAGACCAAAGGGAATAGGACCTGTGAAATTTGTCTGTCGGTTGCTGGGAACGTCTTCACTGAGGAATTAACAGAACATTCGAGTGCTAGCAACATTGCTGCTCCTGCATCAACAACCACAGTCTCAACCCCTCCTCCTTCGGCCGAAACCCGAAGATTCTGGCATGGCCATCGGTTCCTCAACTTTCTGCTTGCTTGTATGGTTTTTGCGTTTGTGATATCATGGCTTTTCCACTTTAATGTACCTTCATCCTAA 696 0.4741 MSTIQMSHVDLEQGNHRRSVAGSDVSADGSVCFSDAEDGSCYSHFYSTNGGSYDDYSFDCVSDSEVRSVPDSRRASSVSDCSVEVEIETGIPEIKVHLCKVERNCRICHLGLESDGHEDESGVPIELGCSCKDDLAIAHKHCAEAWFKTKGNRTCEICLSVAGNVFTEELTEHSSASNIAAPASTTTVSTPPPSAETRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0326 231 SUPERFAMILY RING/U-box 102 160 - -
Bisa06g0326 231 ProSiteProfiles Zinc finger RING-CH-type profile. 97 165 IPR011016 GO:0008270
Bisa06g0326 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 164 IPR013083 -
Bisa06g0326 231 MobiDBLite consensus disorder prediction 1 22 - -
Bisa06g0326 231 PANTHER ZINC FINGER, RING-CH-TYPE 18 230 - -
Bisa06g0326 231 Pfam RING-variant domain 105 158 IPR011016 GO:0008270
Bisa06g0326 231 SMART ringv_2 104 159 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0326 Bisa-ChrBisa06 8364870 8368547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0326 63 231 C3H Transcription Factor Family AT5G05830 59.412 2.22e-66 202