Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0292 ATGTCTGATAAAATTGAGATTCACCTAGTCAATGGAAAGCTTTGACGAATACGTAGAGGCTGGGGGCTTGTGGATGAAGCTGCTGAGCCCGTCACTGCACTACAGAGTTTGGGAGTTCAGGGAAATAGTTGGTTCAGTATGCTTCAAATTCGGCTTAGTAAGGTTCCTGCCTCAGAAGGTTCAGCAGGGGTGAATCCCTCACCTGTAGAGTCCGTTACAGTTACCTGTCCTGAGCATCTAGTCCTTGCTGATCTTCCTGTAGCAAAGGGCATTGGTTCAGCAACAGTTGCTGCCCCTGTTAAGACTTTGGGTCGTAGATCCCGCCGCCAGAGTGGTGAATCTGTCTATTTCTGTGTTCGTTGCGATTTCCCAGTTGCGATCTATGGACGATTGAGCCCTTGTGAGCATGCCTTCTGTCTTGATTGTGCTAGAAGTGATTCAGTATGCTACCTGTGCGATGAACGAATCCAGAAAATTCAGACAATCAAAATGATGGAAGGAATCCTCATCTGTGCTGCTCCTCACTGTTTCAAGTCTTTCTTGAAGAAATCTGAATTTGAATTGCATATCCAAGATGCACATGGTCACCTCATTCGTCCCCATGTACATAAAGAAGATGGAAATGAATCGGAAGCCCATGGTGTTAGGCAATCTACAGCATCAGATTCCTTATCTCGAGGTCCCCAAAGACCTGTTTCTCTTCCCAGTTCAAACTCCCTGCCACATGATCGGGAAGACAAGGCTCGTCGACAGCCACCAAGGGACCAACCAGCTTCAAGGCCAACCCTACAACCAAAGCCGTCATTTCTCGGTCAAGCTCAAAATCACCCTTCGGATCTCCAATCTGGCTCTACTGGTGGCATTCAGCAGGGCTTATATCAACAAAGCTCCGACATGCAGCGACCTTCACAAGAACCTTCCCAGTTTGCAGACAGGCATCGAGGAGTTACTCCAGACACACCATTTCCCGAATATCCGTCCATGCATTCTGCCCAGTCACCCAATTTTGCAATGCCGGTTGATGCAAATCCAATGTTGAACCCTCCTACCCCATTTGGTTATCCCCCTTACCCTCCCCACGACGGAGCTCCACCTTTTTACGTCACTCCTTATGAGATGCGTAGGCAAGACTCGGCTTCGGAGATAGGTGCAGACCAGAGTTCATTACTGGGTTTTCTACCAGGTGCTGCAAGTGGTCCTAATTTTCCATCAAATTATCCCCAGCCCTTGAATGCTGGAACTAGTGGCCTGCCTTTTGAACAAGCACCGAGTGGTATGGCTATGGATCCAAGGGATGCCAAAGGTATATTGGCACCACAGCCAATGGCCCTCCCACCGCCACCTCCACCCCCACCCCACATGTCCCATTTGAAACACAAATATTATTCAGGTGAGTTCGGACACGATGGCCATGGCCATGGCCATGGTTATGGTTGGCAGTATGATAATCGTGACACTTATGGTGGTCAGGACTAG 1476 0.4885 MSDKIEIHLVNGKLXRIRRGWGLVDEAAEPVTALQSLGVQGNSWFSMLQIRLSKVPASEGSAGVNPSPVESVTVTCPEHLVLADLPVAKGIGSATVAAPVKTLGRRSRRQSGESVYFCVRCDFPVAIYGRLSPCEHAFCLDCARSDSVCYLCDERIQKIQTIKMMEGILICAAPHCFKSFLKKSEFELHIQDAHGHLIRPHVHKEDGNESEAHGVRQSTASDSLSRGPQRPVSLPSSNSLPHDREDKARRQPPRDQPASRPTLQPKPSFLGQAQNHPSDLQSGSTGGIQQGLYQQSSDMQRPSQEPSQFADRHRGVTPDTPFPEYPSMHSAQSPNFAMPVDANPMLNPPTPFGYPPYPPHDGAPPFYVTPYEMRRQDSASEIGADQSSLLGFLPGAASGPNFPSNYPQPLNAGTSGLPFEQAPSGMAMDPRDAKGILAPQPMALPPPPPPPPHMSHLKHKYYSGEFGHDGHGHGHGYGWQYDNRDTYGGQD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0292 491 MobiDBLite consensus disorder prediction 261 306 - -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 197 358 - -
Bisa06g0292 491 FunFam E3 ubiquitin-protein ligase Hakai 115 169 - -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 400 491 - -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 213 239 - -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 344 358 - -
Bisa06g0292 491 ProSitePatterns Zinc finger RING-type signature. 134 143 IPR017907 -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 401 418 - -
Bisa06g0292 491 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 166 IPR013083 -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 240 254 - -
Bisa06g0292 491 ProSitePatterns Zinc finger C2H2 type domain signature. 171 194 IPR013087 -
Bisa06g0292 491 CDD RING-HC_HAKAI-like 116 165 IPR040380 -
Bisa06g0292 491 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 47 480 IPR040383 GO:0016567|GO:0061630
Bisa06g0292 491 MobiDBLite consensus disorder prediction 440 455 - -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 458 472 - -
Bisa06g0292 491 MobiDBLite consensus disorder prediction 197 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0292 Bisa-ChrBisa06 6962904 6968950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0292 47 488 C2H2 Transcription Factor Family AT5G01160 42.857 4.38e-97 295