Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0286 ATGATAGTTGCTATGGACTTGAATGCTTCACCAGTACCCGAGGAAGATGATGATACTTTTGAGAGGCATATAGAACAGTATACTCAACCAGAAGAACGCATAGAAAGTGCAGTTGATATAGCACGTCGGGAGCGTGAAGAAAGGAAAAGGCGATTGAAAAGAGAACGAACAGATGATAGACCTGTGCATGTATCACAGTCAACTGGTTATGATCAGATGTTTCACACAAAGATCCAGAAGACATATGATAAAAGTAGGCTTCCTCCAGGATGGTTGGATTGCCCTTCAGCTGGTCAGGAAATCTATTGCATGATCCCTTCCAAGGTTCCGCTTGGTGAATCATTCAATGACTGCATTGCTCCTGGTAAAAGATACTCGTTTAAACAAGTGATACATCAACAAAGAGTATTAGGGAGAAAACTGGGTTTGGTAATTGATTTGACAAATACTACTCGTTACTATCCAGTGTCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGACAATTTATCTGTGAATCAGTTTGTTCACGAGGTTACACAATTTCTATCACGTCAAAAGCAATCAAAGAAATATATACTTGTCCATTGTACACATGGACATAATCGTACAGGATACATGATTGTTCATTATCTTATGCGCTCTATGTCCATGTCTGTCACTCAGGCGATTAAAATATTTTCTGAAGCACGCCCTCCTGGAATTTACAAACCCGATTATATTGATGCTTTGTACACATTTTATCATGAAAAAAAACCTGAAATGGTAGTTTGTCCTTCTACACCCGAGTGGAAGAGATCTTCTGAACTTGATCTTAATGGTGAAGCAGTGCCAGATGATGACGATGATGGAGTGCCGGACCCTCCTTTACAGGAGAAGCATGAGACAGATGCAATAATGACAAATGATGATGTTTTGGGAGATGAGATACCTAGTGATCAACAAAATGGATTTCGACAGTTCTGTTATCAATCACTTAAATTGAACTTTGGGGCTCGTGGACACACACAATTTCCAGGGTCGCACCCAGTTTCTCTTAACAGGGATAATTTACAATTGTTACGGCAGCGTTATTATTATGCAACATGGAAAGCTGATGGAACTCGATATATGATGCTAATAACTATGGATGGATGTTACTTGATTGATAGAAGTTTTAATTTTCGAAGGGTCCAAATGAGGTTCCCTTGCAGGGGCTCAAATGATGGTTTGGCTGAGAAGACCCATCACTACACATTACTTGATGGCGAGATGATTATTGATAAATTGCCAGATTCACAGAAGCAAGAGAGGAGATACCTTATCTATGATATGATAGCAATCAACCACTTATCAGTAATAGAGCGACCATTCTACGAACGGTGGAAGATGCTTGAGAAAGAGGTGATTGAACCTAGGAATCAGGAACGGCATAATACATACCAAAGCAGAAATCCTTACTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGCTGCTCTCGACTGTCACCAAGCTTTTAAAAGAATTCATTCCAAGACTCTCTCATGATGCAGATGGCCTCATATTTCAGGGCTGGGACGATCCTTATATACCACGCACTCATGAAGGCCTACTGAAGTGGAAATATGCAGAGTTGAATTCAGTGGATTTTCTCTTTGAGATTGATGATGATCGCCAGTTACTCTTTCTTTATGAACGAGGAAAGAAGAAACTCATGGAAGGGAATAGGGTTGCATTCAGAGATGGTTCAGATCCCTTGCTTTATTCAGGAAAGATCATAGAGTGTTCTTGGGATTCTGCTGAACAGGAATGGATATACATGCGAATCAGGACAGATAAATCAACTCCGAATGATTTTAATACTTTCAAGAAGGTTATGCGGAGCATAAGAGACAATATCACAGAGGAAGTCTTGTTGAATGAAATTTATGAGATAATTCGCCTTCCCATGTATGCTGACAGGATAAAAATTGATAGCAAAGCCCACCATCATAGTGGTGCGGCACGCCGGAGGTGA 2046 0.4032 MIVAMDLNASPVPEEDDDTFERHIEQYTQPEERIESAVDIARREREERKRRLKRERTDDRPVHVSQSTGYDQMFHTKIQKTYDKSRLPPGWLDCPSAGQEIYCMIPSKVPLGESFNDCIAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKEGIKHVKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKQSKKYILVHCTHGHNRTGYMIVHYLMRSMSMSVTQAIKIFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPSTPEWKRSSELDLNGEAVPDDDDDGVPDPPLQEKHETDAIMTNDDVLGDEIPSDQQNGFRQFCYQSLKLNFGARGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDKLPDSQKQERRYLIYDMIAINHLSVIERPFYERWKMLEKEVIEPRNQERHNTYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDPYIPRTHEGLLKWKYAELNSVDFLFEIDDDRQLLFLYERGKKKLMEGNRVAFRDGSDPLLYSGKIIECSWDSAEQEWIYMRIRTDKSTPNDFNTFKKVMRSIRDNITEEVLLNEIYEIIRLPMYADRIKIDSKAHHHSGAARRR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0286 681 Gene3D - 592 658 IPR012340 -
Bisa06g0286 681 MobiDBLite consensus disorder prediction 45 66 - -
Bisa06g0286 681 PIRSF mRNA_capping_HCE 73 681 IPR017074 GO:0004484|GO:0006370|GO:0140818
Bisa06g0286 681 Gene3D Protein tyrosine phosphatase superfamily 62 282 IPR029021 -
Bisa06g0286 681 MobiDBLite consensus disorder prediction 283 303 - -
Bisa06g0286 681 SMART dsp_5 121 261 IPR020422 GO:0006470|GO:0008138
Bisa06g0286 681 CDD Adenylation_mRNA_capping 342 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bisa06g0286 681 Gene3D DNA ligase/mRNA capping enzyme 312 551 - -
Bisa06g0286 681 FunFam mRNA capping enzyme family protein 83 297 - -
Bisa06g0286 681 SUPERFAMILY Nucleic acid-binding proteins 554 665 IPR012340 -
Bisa06g0286 681 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 253 IPR000387 GO:0016311|GO:0016791
Bisa06g0286 681 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 276 IPR029021 -
Bisa06g0286 681 Pfam Dual specificity phosphatase, catalytic domain 139 259 IPR000340 GO:0008138|GO:0016311
Bisa06g0286 681 Pfam mRNA capping enzyme, C-terminal domain 556 649 IPR013846 -
Bisa06g0286 681 ProSiteProfiles ATP-dependent DNA ligase family profile. 435 579 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bisa06g0286 681 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 313 552 - -
Bisa06g0286 681 FunFam mRNA capping enzyme, putative 312 549 - -
Bisa06g0286 681 Pfam mRNA capping enzyme, catalytic domain 353 551 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bisa06g0286 681 FunFam mRNA capping enzyme family protein 550 658 - -
Bisa06g0286 681 PANTHER MRNA-CAPPING ENZYME 81 663 - -
Bisa06g0286 681 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Bisa06g0286 681 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 265 IPR020422 GO:0006470|GO:0008138
Bisa06g0286 681 Coils Coil 38 58 - -
Bisa06g0286 681 CDD RNA_5'-triphosphatase 90 256 - -
Bisa06g0286 681 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0286 Bisa-ChrBisa06 6870301 6889148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0286 1 681 Protein tyrosine phosphatase (PTP) family AT3G09100 71.616 0.0 988