Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0278 ATGAACAGGGGAATTGAAGTTCTCTCTCCAGCATCCTACCTCCAGAACTCTAATTGGCTGTTCCAGGAAAGCAAAGGAGCCAAATGGACTGCAGAAGAGAACAAGCAGTTTGAGAACGCTTTGGCTCTGTTTGATAAGGACACACCAGATCGTTGGCTGAAAGTAGCAGCCATGATTCCAGGCAAGACTGTGGATGATGTGATCAAACAGTACAGAGAACTTGAAGAAGATGTGAGTGTCATTGAGGCTGGGATGATCCCAATTCCTGGCTACAGTAGTAGTTCCTTCACATTGGAGTGGATCAATAGCCATGGCTTTGATGGGTTCAAGCAATTTGATGCTGCTAATGGCAAAAGAGGTACCCCCACCAGGCCATCTGAGCAGGAAAGGAAGAAAGGAGTTCCATGGACTGAGGAGGAGCACAGGCTGTTTCTGATGGGTCTGAAGAAGTATGGTAAAGGTGACTGGAGAAACATCTCACGTAACTTCGTGACGACAAGAACTCCTACTCAGGTTGCGAGTCACGCCCAGAAGTACTTCATCAGACAGCTTACCGGAGGGAAAGATAAGAGGAGATCCAGTATCCATGATATCACAATGGTGAATCTCCCAGATACAAAACCCCCTGCATCAGACAGTATCAGACCTGCTTCTTCAAATCATCCCATGAAGGTTGTGAATCTGAATCCACAGCAGAATCAGAAATTCTCTGGCATGGTGAAACAGGAATATGACATGCCAATGGTGTTCAATGGCACAAATGGGAACATGTTCTTGGCACCTCTTCATGGGATCTCGTCGCATGGATTGAAACCTCATGGATGTGACTTTGGACCTTATGATAGTATTCTTCAAATGCAAGCGATGCAGCATCCTTGA 879 0.4608 MNRGIEVLSPASYLQNSNWLFQESKGAKWTAEENKQFENALALFDKDTPDRWLKVAAMIPGKTVDDVIKQYRELEEDVSVIEAGMIPIPGYSSSSFTLEWINSHGFDGFKQFDAANGKRGTPTRPSEQERKKGVPWTEEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLPDTKPPASDSIRPASSNHPMKVVNLNPQQNQKFSGMVKQEYDMPMVFNGTNGNMFLAPLHGISSHGLKPHGCDFGPYDSILQMQAMQHP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0278 292 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Bisa06g0278 292 MobiDBLite consensus disorder prediction 112 135 - -
Bisa06g0278 292 Gene3D - 21 88 - -
Bisa06g0278 292 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 235 IPR043363 -
Bisa06g0278 292 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Bisa06g0278 292 ProSiteProfiles Myb-like domain profile. 21 75 IPR001005 -
Bisa06g0278 292 CDD SANT 135 180 IPR001005 -
Bisa06g0278 292 CDD SANT 28 74 IPR001005 -
Bisa06g0278 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Bisa06g0278 292 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Bisa06g0278 292 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Bisa06g0278 292 Gene3D - 134 184 - -
Bisa06g0278 292 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Bisa06g0278 292 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Bisa06g0278 292 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Bisa06g0278 292 SMART sant 132 182 IPR001005 -
Bisa06g0278 292 SMART sant 25 77 IPR001005 -
Bisa06g0278 292 FunFam Transcription factor SRM1 21 88 - -
Bisa06g0278 292 FunFam transcription factor MYB1R1 134 185 - -
Bisa06g0278 292 SUPERFAMILY Homeodomain-like 28 82 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0278 Bisa-ChrBisa06 6744641 6746163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa06g0278 Myb_DNA-binding 2.1e-12 CL0123