Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0232 ATGTTTGGAAATTGCTTTGGTGTCTTGAATTGGTGCAAAGGGAGGAATAATCCTGCTGAGCAGTCACATGAACAAGTGATATCAACTAAAAAATTTAGCTATAACTCATTAAGATCCGCAACAGGAGATTTTCATCCATCAAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTTTACAAGGGAGTTTTAACGGATGGAGCTCAAGTTGCTATTAAGTCTCTTTCTCTAGACCTTGCAAGTTCTTTGCTTGGGTCCAGAAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATTTGCCGCGGTACAGCTTGTGGTCTTGCGTTTCTTCATGAAGAGACTCAACCAAACATTGTACACAGAGACATCAAGGCTAGCAACATACTGCTTGATGAGAACTTCAATCCTAAAATAGGGGACTTCGGCCTTGCCAAGCTTTTTCCTGACAACGTCACCCATGTTAGTACTCGAGTGGCAGGAACTGTGGGATATCTTGCACCAGAATATGCACTTCTAGGACAGCTTACAAAAAAGGCAGATGTGTATAGTTTTGGTGTTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGTAGCAAAGCTGCATTTGGAGATAACCTGTTGGTTCTGGTGGAATGGATTTGGAAACTAAAAGAAGTAAACAGGCTTCTGGACATCGTTGATCCAGAACTAACATCGTACGATGAGACTGAGGTTTTGCGTTTCATTAAGGTTGCTCTGTTTTGTACCCAATCAGCTCAACATCACAGACCAACCATGAAGCAAGTAGTGGAAATGCTTTCCAAGGAAGTTCATCTCAATGACATGGCTTTAACTGAACCTGGAGTTTATAGATGGCATGCCTCTAAAAACGAGGTAAGTTCTTTGGATATGTCATCAACTTCTCAAGTGACCAACTTTAGAAGACCTGAAAATCAGTTTAGTGGTACTGATATTGTCACAGAGATGCTTCCAAGATGA 981 0.4128 MFGNCFGVLNWCKGRNNPAEQSHEQVISTKKFSYNSLRSATGDFHPSSKIGGGGYGVVYKGVLTDGAQVAIKSLSLDLASSLLGSRSKYVALDWPKRAAICRGTACGLAFLHEETQPNIVHRDIKASNILLDENFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGDNLLVLVEWIWKLKEVNRLLDIVDPELTSYDETEVLRFIKVALFCTQSAQHHRPTMKQVVEMLSKEVHLNDMALTEPGVYRWHASKNEVSSLDMSSTSQVTNFRRPENQFSGTDIVTEMLPR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0232 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Bisa06g0232 326 Pfam Protein kinase domain 98 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0232 326 SUPERFAMILY Protein kinase-like (PK-like) 29 302 IPR011009 -
Bisa06g0232 326 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 28 76 - -
Bisa06g0232 326 Gene3D Transferase(Phosphotransferase) domain 1 81 280 - -
Bisa06g0232 326 ProSiteProfiles Protein kinase domain profile. 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0232 326 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Bisa06g0232 326 SMART serkin_6 44 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0232 326 FunFam Putative LRR receptor-like serine/threonine-protein kinase 73 279 - -
Bisa06g0232 326 Gene3D Phosphorylase Kinase; domain 1 18 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0232 Bisa-ChrBisa06 5770431 5775922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0232 32 315 Receptor kinase-like Gene Family AT1G56120 41.692 7.86e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa06g0232 Pkinase 2.4e-26 CL0016