Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0230 ATGGGAACAGGAAACTTTATATGGAATTTTACAAAGAAATTTATCACATTCGGGGTCATTACGGTGACAGTGTCTGATCGTTATGCGACCATTGTTCCAGTTCGTGGTGGCTCCATGTCTCCCACATTTAATCCTAAAACCAGTTCTTCAATGGGAAATTATTCTGATGACTATGTTTTGGTTGAAAAATTTTGCCTCCACAAGTACAAGTTTTCCCACGGTGATATAGTGGTATTCCGCTCCCCCTTGAATCACAACGAGACACACATAAAGAGAATAGTTGCATTACCTGGTGAGTGGTTTGGTGCCCATCGTAACTATGATGTGCTGAAGGTTCCGGAAGGACATTGTTGGGTTGAGGGAGACAACGCATCTTCTAGCATGGATTCAAACTCATTTGGTTCTATTCCTTTGGGTCTGATTCGAGGAAGAGTGACCCACATTGTATGGCCTCCTCAAAGAATAGGTGCAGTAAAGAAAACTCCACCAGAAGGATTATCTTAA 504 0.4206 MGTGNFIWNFTKKFITFGVITVTVSDRYATIVPVRGGSMSPTFNPKTSSSMGNYSDDYVLVEKFCLHKYKFSHGDIVVFRSPLNHNETHIKRIVALPGEWFGAHRNYDVLKVPEGHCWVEGDNASSSMDSNSFGSIPLGLIRGRVTHIVWPPQRIGAVKKTPPEGLS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0230 167 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Bisa06g0230 167 Gene3D Umud Fragment, subunit A 27 161 - -
Bisa06g0230 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa06g0230 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa06g0230 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa06g0230 167 SUPERFAMILY LexA/Signal peptidase 30 158 IPR036286 -
Bisa06g0230 167 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 163 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Bisa06g0230 167 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
Bisa06g0230 167 Pfam Signal peptidase, peptidase S26 9 99 IPR019533 GO:0004252|GO:0006465
Bisa06g0230 167 Pfam Signal peptidase, peptidase S26 109 150 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0230 Bisa-ChrBisa06 5730523 5733807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0230 39 162 MADS-box Gene Family AT1G29960 40.000 1.22e-22 85.9