Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0146 ATGAACATGGACGTCGACGACGCTTCTAAACGCAAAGACGGAAAGCTCTTATTGGTCATGTTAGTAGGAGCACCAGGTAGCGGCAAGTCCACCTTCTGCGAAGAAGTTATGCGCTCTTCTACTCGTCCTTGGGTTCGCATTTGCCAGGACACCATTGGCAATGGTAAAGCAGGAAATAAATCTCAGTGCCTAAGCAGTGCAGCTGCTGCATTGAAGAATGGGAAGAGTGTATTTATTGACAGGTGCAATCTTGATAGAGGACAGCGTTCAGGATTTGTAGAGCTTGGTGGACCCCAAATAGATGTGCATGCAATTGTGCTTGATCTTCCTGCAAAGCTTTGTATTTCTCGATCTGTCAAACGGACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCGGTAGTGCATAGAATGCTTCAAAACAAGGAGCTGCCCAAGTTAAGTGAAGGTTTTAACCGGATAACATTTTGTGAAAATGAGAGTGATGTCAAAGCGGCTATTAATACATACCGTGCACTTGGGCCATTGGATAACCTTCCAAATGGATGCTTTGGTCAGAAGAGTCCAGATGCCAAAGTGCAGGTAGGTATAATGAAGTACCTGAAAAAGCCAGCGGTCCCAAAAGATGCCAAGTCTGGTGAGGATAGCATTAGAAATTCTACTTCTTCCCAAACTGTTGAGACAACGGATCCATGTGGTAAAGATATGGAAAATTTTTTGCCTATTTCAGATAAAACCAACTCGGAGTCTAAGAATATAGAAAATTTGGCCGTTGGCTCTGGTTCCGATGTCAATCAAATTTTAATGGATGATGCTCCTACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTCAACCATGAGAAGGCAGCTGATATTATTGTGGAGAAAGTTGCCGAGTTCTCAAAGAAGCTTGGCAATGCCAGACTTGTTTTAGTTGACCTGACTCATGGGTCAAAGATTTTGTCTTTAGTTATAGCTAAAGCTGCACAGAAAAACTTAGACTCCAGAAGGTTTTTAACCCATGTTGGGGACATTACTCAGCTTTATTCCACCGGAGGTTTGCGCTGTACAGTAATAGCTAATGCTGCCAACTGGCGATTGAAACCTGGAGGTGGAGGAGTTAATGCTGCAATTTTCAATGCTGCAGGTCCTGCCCTGGAGTCTGCAACTAAAGAACGAGCACAATCTCTTTTACCTGGGAATGCTGTTGTTGTTCCTCTGCCTTCATCTTCTCCTTTGTTTACTAGAGAGGGAGTAACCCATGTAATACATGTTCTTGGACCAAATATGAACCCACGGAGGCCAAATTGTCTCAATAATGATTACAATAAAGGATGCAAGATTCTCAAAGAGGCTTACACTTCACTATTTGAAGCTTTTGCATCAATAGTGAGGCCTGCGGCAGAGCAAAAGAGCAAGAGAGATGCTGATCATGGATTTGAAAAAAGCAAGAAATACAAGGGGACTGGGGATGATGGTGAACTGAACACTGATTCCAGGGTTGACAATGTAGATTCAAATAATAAACAAACTCATGGCAGCATGAATAAGACATGGCCATCATGGACTCAAGCACTTCACAACATGGCTAAGCATCCTGAAAAGTATAATGATTTGATTGAAATATCTGAAGATGTTGTTGTACTGAATGATCTGTATCCTAAGGCACAAAAGCATGTTCTGGTGGTGGCACGAACTGAAGGCCTTGATTCCCTGGCTGATGTTCTACATGACCATCTTCCCTTATTAAAGAAGATGCATGCTGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGCATGAGAATGCTTCATTGGTTTTTCGTCTCGGATATCATTCGGCTCCATCAATGCGACAACTGCACTTACATGTTATCAGCCAGGACTTCGAATCGAAACATCTGAAGCACAAGAAGCACTGGAACTCGTTCACCACAGCTTTCTTTCGTGACTCGGTTGATGTAGTTGATGAGGTCTCTAACAATGGGAAGGCAACCTTGAAAGATGATGACAAGCTGCTGTCCATGGAGTTGAGGTGCCATAGATGCAGAAGTGCACATCCTAACATTCCCAGGTTGAAATCTCATATTAGCAGTTGCCAAGCTCCCTTCCCAGCACACCTACTTCAAAATGGTCGTTTGGTTCATGCACAAGGCGAAGCTAGCATGAGTTCATAG 2187 0.433 MNMDVDDASKRKDGKLLLVMLVGAPGSGKSTFCEEVMRSSTRPWVRICQDTIGNGKAGNKSQCLSSAAAALKNGKSVFIDRCNLDRGQRSGFVELGGPQIDVHAIVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVHRMLQNKELPKLSEGFNRITFCENESDVKAAINTYRALGPLDNLPNGCFGQKSPDAKVQVGIMKYLKKPAVPKDAKSGEDSIRNSTSSQTVETTDPCGKDMENFLPISDKTNSESKNIENLAVGSGSDVNQILMDDAPTLAFPSISTSDFQFNHEKAADIIVEKVAEFSKKLGNARLVLVDLTHGSKILSLVIAKAAQKNLDSRRFLTHVGDITQLYSTGGLRCTVIANAANWRLKPGGGGVNAAIFNAAGPALESATKERAQSLLPGNAVVVPLPSSSPLFTREGVTHVIHVLGPNMNPRRPNCLNNDYNKGCKILKEAYTSLFEAFASIVRPAAEQKSKRDADHGFEKSKKYKGTGDDGELNTDSRVDNVDSNNKQTHGSMNKTWPSWTQALHNMAKHPEKYNDLIEISEDVVVLNDLYPKAQKHVLVVARTEGLDSLADVLHDHLPLLKKMHAVGLKWAEKFLHENASLVFRLGYHSAPSMRQLHLHVISQDFESKHLKHKKHWNSFTTAFFRDSVDVVDEVSNNGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQAPFPAHLLQNGRLVHAQGEASMSS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0146 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 334 474 IPR043472 -
Bisa06g0146 728 Pfam Scavenger mRNA decapping enzyme C-term binding 532 643 - -
Bisa06g0146 728 FunFam aprataxin isoform X2 525 704 - -
Bisa06g0146 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 161 IPR027417 -
Bisa06g0146 728 SUPERFAMILY HIT-like 519 687 IPR036265 -
Bisa06g0146 728 MobiDBLite consensus disorder prediction 218 233 - -
Bisa06g0146 728 MobiDBLite consensus disorder prediction 505 523 - -
Bisa06g0146 728 Gene3D - 526 706 IPR036265 -
Bisa06g0146 728 ProSitePatterns HIT domain signature. 612 630 IPR019808 -
Bisa06g0146 728 Pfam C2HE / C2H2 / C2HC zinc-binding finger 648 701 IPR032566 -
Bisa06g0146 728 FunFam Transcription factor bHLH140 6 174 - -
Bisa06g0146 728 Gene3D - 3 174 IPR027417 -
Bisa06g0146 728 Pfam Macro domain 365 439 IPR002589 -
Bisa06g0146 728 SUPERFAMILY Macro domain-like 331 463 IPR043472 -
Bisa06g0146 728 Pfam AAA domain 18 126 - -
Bisa06g0146 728 PANTHER APRATAXIN-RELATED 277 703 - -
Bisa06g0146 728 SUPERFAMILY Macro domain-like 275 312 IPR043472 -
Bisa06g0146 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 253 333 IPR043472 -
Bisa06g0146 728 MobiDBLite consensus disorder prediction 209 238 - -
Bisa06g0146 728 MobiDBLite consensus disorder prediction 473 504 - -
Bisa06g0146 728 SMART YBR022w_8 342 594 IPR002589 -
Bisa06g0146 728 MobiDBLite consensus disorder prediction 473 523 - -
Bisa06g0146 728 FunFam Transcription factor bHLH140 323 470 - -
Bisa06g0146 728 ProSiteProfiles Macro domain profile. 330 585 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0146 Bisa-ChrBisa06 3600479 3604757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0146 14 718 C2H2 Transcription Factor Family AT5G01310 60.055 0.0 859