Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0130 ATGGCCTCTCCCCCAATCCCCTTGGCTTACCAAGAGCATCTCCCTGTTTCTCCTTACTGGCTAAACAAAGGAGACAACGCATGGCAAATGACAGCAGCTACTCTAGTGGGTCTTCAGAGCATGCCAGGACTTGTGATTCTGTATGCAAGCATCGTCAAGAAGAAATGGGCAGTGAACTCTGCCTTCATGGCTCTCTATGCCTTCGCTGCTGCACTCATCTGTTGGGTCCTCGTATGTTTCAGAATGGCCTTTGGAGATCAACTCCTTCCCTTCTGGGGTAAGGGTGCCCCAGCGCTAGGCCAAAAGTTCCTCATAAACCGAGCCAAAGTCCCTGAAAGCACACACCACTTCAGCAATGGAACCATAGAAACTCCAACAACAGAGCCATTTTTTCCCATGGCTTCCCTTGTCTATTTCCAGTTTACCTTTGCTGCTATTACCCTCATCTTGCTCGCTGGTTCGGTTCTTGGCCGTATGAACATTAAGGCCTGGATGGCTTTTGTCCCTCTCTGGCTCATTTTCTCATACACCGTAGGGGCATTCAGCTTATGGGGCGGTGGTTTCCTCTACCACTGGGGCGTCATCGATTACTCCGGCGGCTACGTCATCCACCTCTCATCCGGAGTCGCCGGCTTCACCGCCGCATACTGGGTTGGACCGAGACTGAAGAGCGATAGGGAGAGGTTTCCACCCAACAATGTGCTGCTGATGCTTGCGGGAGCTGGGCTTCTGTGGATGGGGTGGTCGGGGTTCAACGGTGGAGCGCCATACTCTGCGAGCCTAGACTCATCAATAGCAGTGTTGAACACGAACATATGCGCAGCGACGAGCCTTCTGGTGTGGACGTCGCTCGACGTCGTCTTCTTCGGAAAGCCGTCGGTGATCGGAGCTGTTCAGGGAATGATGACCGGACTGGTTTGCATCACCCCCGGAGCAGGGCTAGTGCAATCATGGGCGGCTATAGTAATGGGAATACTCTCAGGCAGCATTCCATGGTTCTCCATGATGATCCTTCACAAAAAGTCTACTCTTCTTCAAAAGGTAGATGACACCCTAGGCGTATTTCACACACACGCAGTGGCAGGGCTTCTGGGTGGCCTCCTCACCGGTCTACTAGCTGAGCCGGAACTTTGCCGGCTGCTACTTCCGGTGACTAACTCGAGAGGTGCCTTCTACGGTGGTAGCGGCGGCATGCAGCTCGTGAAGCAGTTGGTGGGAGCCCTATTTGTGATGGGATGGAACCTAGTGTCCACCACTCTCATTCTTCTTGCCATTCGACTGTTCATACCGTTGAGGATGTCGGACGAGCAACTCGAGATCGGTGACGACGCCGTGCACGGCGAGGAGGCCTATGCACTTTGGGGTGATGGAGAGAGGTATGACCCAACAAGACATGGCGCCTCAGATGTGCATGGAAGTGCAGTATCACCTTATGTGAATGGTGCAAGAGGTGTAACCATAAATTTATGA 1470 0.5313 MASPPIPLAYQEHLPVSPYWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAALICWVLVCFRMAFGDQLLPFWGKGAPALGQKFLINRAKVPESTHHFSNGTIETPTTEPFFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGVAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYSASLDSSIAVLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWFSMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPELCRLLLPVTNSRGAFYGGSGGMQLVKQLVGALFVMGWNLVSTTLILLAIRLFIPLRMSDEQLEIGDDAVHGEEAYALWGDGERYDPTRHGASDVHGSAVSPYVNGARGVTINL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0130 489 NCBIfam ammonium transporter 25 451 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bisa06g0130 489 PRINTS Rhesus blood group protein signature 359 375 IPR002229 GO:0005886
Bisa06g0130 489 PRINTS Rhesus blood group protein signature 321 339 IPR002229 GO:0005886
Bisa06g0130 489 PRINTS Rhesus blood group protein signature 235 253 IPR002229 GO:0005886
Bisa06g0130 489 PRINTS Rhesus blood group protein signature 266 288 IPR002229 GO:0005886
Bisa06g0130 489 PRINTS Rhesus blood group protein signature 140 156 IPR002229 GO:0005886
Bisa06g0130 489 PANTHER AMMONIUM TRANSPORTER MEP2 15 461 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bisa06g0130 489 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bisa06g0130 489 Pfam Ammonium Transporter Family 27 451 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bisa06g0130 489 Gene3D Ammonium transporter AmtB like domains 10 454 IPR029020 -
Bisa06g0130 489 FunFam Ammonium transporter 9 454 - -
Bisa06g0130 489 SUPERFAMILY Ammonium transporter 20 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0130 Bisa-ChrBisa06 2821228 2824906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0130 133 489 Inorganic Solute Cotransporters AT2G38290 78.273 0.0 553