Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0122 ATGGCTACATCATCATCATCACCAACAGTTGGGTTCCTCCACTTCCTGCTTTCTCTGCTATTTGTAGCCATGGCTCAATCAGAGTACGAGTTATCCTACGAAGGATTCCTTGGTAAAGAAGCAAATCTAACCTTTAATGGTTCCATTATCGATGAAAGGGGTCGGCTCAAGCTCACCAACAGTTCCTCCAATATTATAGGCCGTGCCTTCCATAACAAATCCTTGCCAATGCATTACAATTCAACATCAGAAAATCAGAAAGCTTATTCCTTTAGCACATACTTTGTGTTCTCCATTGTCCGCTCAACCCCTGCCTTTGGTGGCTTCGGCCTCTCTTTCGCCATGACCCAATCACCACACATTACTGCCGGTCCTGGCCATTTACTTGGTCTTTATACCAACGCCATTGATACTTCAAAACACATATTTGCCGTTGAATTTGATACGGTAGATGGGTCTGACTCAGGTGAGTCTGACAAGAAAGCGAATGATGTTGGGGTGAATATAGAAGGAAAAATCTCAGATATCTCTACACCAGCTGCTTACTATGAAGGCCCAAATGCTCAGTTAAAGAACTTCAGTATGGAGGAAGCTGATGCTGTACAAGTTTGGATAGAATATGACGGTGACAAGAAAACTGTGAATGTAACCATAGCTCCAAGATCAAAGCCTAAACCCTCCAGACCACTTATATTAAATGAACGCATTAACCTTACCAATGTCCTAAGGGACGAAATGTATGTTGGTTTCTCAGCATCCACAGGGGACAAGATAGCAAGCTCTCCTTACATTCTGGGATGGAGCTTTGCTATCAATGGAACTGCTCCTACACTGGACATTAACAATCTTCCTGATCCCCCACCAAAGGAGAAAGACCCATCGTCTTTTCCTTGGGTCAACGTTGTAATAGGAGTTCAGTCTTCTTTAATCTTGATCTTGCTGTTTTCTCTGTGTTCTCTAACGTTGTACATGAGGAACTTGAATTTCGAGCCTCTTGAGGATTGGGAGCTAGATTGTCCTCACAGATTCAAATACGGAGATCTTCACACAGCAACAAAAGGGTTCAATGAGAGTGAGCTGATTGGAGTTGGAGGCTTTGGTGCTGTTTACAGAGGTGTGTTGCCTTCTACAGGATCTGAGGTTGCTGTTAAGAAGATTGCTCGCAGCCCAGTTCATGGGATGAGGGAATTTGCTGCTGAAATTGAAAGCCTAGGAAGATTAAGACACAAGAATTTAGTCAATCTTCAAGGATGGTGTAAGAGAAAAAACGATCTTCTCCTAATCTATGATTACATCCCCAGTGGAAGCCTTGACTCGCTTCTCTTCAATCCCAATCAAAGCGTTGTCTTGAACTGGGACCAAAGGTTCAGTATTATCAAAGGCATAGCCAATGGTCTGCTCTATCTTCATGAAGAGTGGGAGCAAGTGGTGGTCCACAGAGACATCAAAACCAGCAATATTCTCATAGATACAGATTTAAAAGCTCGTTTAGGTGATTTTGGCCTGGCTAGACTATATGATCATGGTGAAGTATCACACACAACCAATGTGGTTGGGACAATAGGGTATATAGCACCAGAATTGACTCGAACAGGAAAGGCTTCCACAAGCTCTGATGTGTATGCATATGGAGTTCTGCTTCTTGAAGTGGCCAGTGGAAGAAGACCCATTGGCTCTGGACAATTCTTTCTGGTGGATTGGGTTGTAGAGAATTACAACCTGGGTCAGATTCTTGAGGTGGTTGACCCAAAGTTGAACTCATCTTATCTTGCGGAAGAGGTGGAGTTGGTTCTGAAACTGGGTCTTCTGTGTGCTCGGCATGATGCAGATTCAAGACCCACCATGAGACAAGTGATGAGGTACCTAAATTTTGATGACCCTCTTCCTGAAATTGGAGATTGGAGGAGACACAGTGATGGTGAGAGTGGCAGATTGAGCTTTGGTTTCTTAGAAATGGCGTCTGCAAGTAGTATATCAACTTCACATATTTCATCCTCTAACAGTAGCATGAATGCTAGGTCTCTAGAACCTGGCAGATAG 2040 0.4348 MATSSSSPTVGFLHFLLSLLFVAMAQSEYELSYEGFLGKEANLTFNGSIIDERGRLKLTNSSSNIIGRAFHNKSLPMHYNSTSENQKAYSFSTYFVFSIVRSTPAFGGFGLSFAMTQSPHITAGPGHLLGLYTNAIDTSKHIFAVEFDTVDGSDSGESDKKANDVGVNIEGKISDISTPAAYYEGPNAQLKNFSMEEADAVQVWIEYDGDKKTVNVTIAPRSKPKPSRPLILNERINLTNVLRDEMYVGFSASTGDKIASSPYILGWSFAINGTAPTLDINNLPDPPPKEKDPSSFPWVNVVIGVQSSLILILLFSLCSLTLYMRNLNFEPLEDWELDCPHRFKYGDLHTATKGFNESELIGVGGFGAVYRGVLPSTGSEVAVKKIARSPVHGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLIYDYIPSGSLDSLLFNPNQSVVLNWDQRFSIIKGIANGLLYLHEEWEQVVVHRDIKTSNILIDTDLKARLGDFGLARLYDHGEVSHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLLLEVASGRRPIGSGQFFLVDWVVENYNLGQILEVVDPKLNSSYLAEEVELVLKLGLLCARHDADSRPTMRQVMRYLNFDDPLPEIGDWRRHSDGESGRLSFGFLEMASASSISTSHISSSNSSMNARSLEPGR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0122 679 Pfam Legume lectin domain 31 283 IPR001220 GO:0030246
Bisa06g0122 679 ProSiteProfiles Protein kinase domain profile. 355 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0122 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Bisa06g0122 679 FunFam L-type lectin-domain containing receptor kinase S.4 432 634 - -
Bisa06g0122 679 Gene3D - 28 281 - -
Bisa06g0122 679 SUPERFAMILY Protein kinase-like (PK-like) 339 625 IPR011009 -
Bisa06g0122 679 PANTHER - 46 624 - -
Bisa06g0122 679 Pfam Protein kinase domain 355 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0122 679 Gene3D Transferase(Phosphotransferase) domain 1 432 631 - -
Bisa06g0122 679 CDD STKc_IRAK 361 623 - -
Bisa06g0122 679 CDD lectin_legume_LecRK_Arcelin_ConA 30 273 IPR001220 GO:0030246
Bisa06g0122 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 288 IPR013320 -
Bisa06g0122 679 ProSitePatterns Protein kinases ATP-binding region signature. 361 385 IPR017441 GO:0005524
Bisa06g0122 679 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Bisa06g0122 679 FunFam serine/threonine-protein kinase PBS1-like 327 431 - -
Bisa06g0122 679 SMART serkin_6 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0122 Bisa-ChrBisa06 2357219 2359358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0122 22 639 Receptor kinase-like Gene Family AT5G01560 49.604 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa06g0122 Pkinase 5.6e-49 CL0016