Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0117 ATGGCCACAGATGCCGCAACGAAATTCCGCGACGCCGTTCCCGGCGAATTCCAGCCAGAAATTTCAGTGTCTCCAGCCGCGACCCACGACGGCCTGGAATTCTGGCAATACATGATAGCAGGCTCGATAGCAGGTTCAATCGAGCACATGGCGATGTTTCCGGTGGATACTCTCAAGACTCGAATGCAAGCCATGGTCCGCTCGGATCCGATTCGCAAACTCGGGGTCCGGCGATCGCTCGGTTCGATTCTGAAGCTCGAAGGCGCATCGGGACTCTATCGAGGTATAGCGGCGATGGGCCTCGGAGCGGGGCCCGCACACGCCGTGTATTTCTCGGTGTACGAGATCTGTAAAGAGAATCTCTCCGGCGGAGATCCAAACAACTCCGCCGCGCACGCGGTCTCCGGCGTCTGTGCAACTGTCGCGAGCGACGGCGTGATGACGCCGATGGACGTGGTGAAGCAGAGGTTGCAGTTGCAGAGCACTCCGTACAAGGGAGTATGGGATTGCGTGAAGAGAGTAGCGAGGGAAGAAGGTGTTGGCGCGTTTTACGCTTCGTATCGCACTACGGTGGTGATGAATGCGCCGTTCACGGCGGTGCATTTTGCGGCGTATGAAGCGGCGAAGAGGGGACTGACGGAGGTGTCGCCGGAGAGAGCGGAAGGCGAGAGTCTGGTGGTCCACGCCACCGCCGGAGCTGCAGCCGGGGCGGTGGCTGCGGCGGTGACTACCCCTCTCGATGTTGCGAAGACTCAGCTACAATGCCAGGGTGTATGTGGGTGTCACAAATTTACCAGCAGCTCAATAGGGCATGTGATTCAAACAGTGATAAACAAAGATGGCTACAAGGGCCTCATCAGAGGATACATCCCCAGGATGCTCTTTCATGCCCCTGCTGCTGCTATTTGTTGGTCTACTTATGAAGCCTCCAAGTCTTTCTTTCACCAAAGACAATTGCACTAA 963 0.5691 MATDAATKFRDAVPGEFQPEISVSPAATHDGLEFWQYMIAGSIAGSIEHMAMFPVDTLKTRMQAMVRSDPIRKLGVRRSLGSILKLEGASGLYRGIAAMGLGAGPAHAVYFSVYEICKENLSGGDPNNSAAHAVSGVCATVASDGVMTPMDVVKQRLQLQSTPYKGVWDCVKRVAREEGVGAFYASYRTTVVMNAPFTAVHFAAYEAAKRGLTEVSPERAEGESLVVHATAGAAAGAVAAAVTTPLDVAKTQLQCQGVCGCHKFTSSSIGHVIQTVINKDGYKGLIRGYIPRMLFHAPAAAICWSTYEASKSFFHQRQLH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0117 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 313 IPR018108 -
Bisa06g0117 320 FunFam Mitochondrial RNA-splicing protein MRS3 162 319 - -
Bisa06g0117 320 Gene3D Mitochondrial carrier domain 127 320 IPR023395 -
Bisa06g0117 320 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Bisa06g0117 320 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Bisa06g0117 320 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Bisa06g0117 320 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Bisa06g0117 320 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Bisa06g0117 320 Pfam Mitochondrial carrier protein 224 316 IPR018108 -
Bisa06g0117 320 Pfam Mitochondrial carrier protein 32 121 IPR018108 -
Bisa06g0117 320 Pfam Mitochondrial carrier protein 128 213 IPR018108 -
Bisa06g0117 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 211 IPR018108 -
Bisa06g0117 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 120 IPR018108 -
Bisa06g0117 320 PANTHER MITOFERRIN-1-RELATED 27 316 - -
Bisa06g0117 320 SUPERFAMILY Mitochondrial carrier 30 308 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0117 Bisa-ChrBisa06 2269039 2271944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0117 1 316 Chloroplast and Mitochondria Gene Families AT1G07030 68.652 3.32e-155 436