Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0102 ATGGGGGCTGGGAGGAAAACACAAACTTTTTATGCCGGTGGGATTCAATCTATATCTTCAAATTCAGTAGCCAGTTCTGTATGTGGCCGAAATTTGGGGAAGAATCAACTTGGCGGTGTTATATTTGGTTGCAAGAATGCGACAATGAAAGAATGTCTATCTAAACAACTCTTTGGCTTACCGGCTCAGCACTTCTGCTATGTGAAGAATATTGATCCTGGGCTGCCTCTCTTTCTGTTCAACTATAGTGAAAGGAAGCTTCATGGAATCTTTGAGGCAGCTAGCAGGGGGCAAATGAATATAGACCCATACGGATGGACTACTGATGGCTCAGAGAGAACTCAGTATCCTGCACAGGTGCAAATTCATGTCCGGCTTCAGTGCCAGCCACTGTCTGAAGATAAATTCAGACCAATAATTGTGGACAACTATTACATTAATAATCACTTTTGGTTTGAGCTAGACCATGTACAAACTAGCAAGCTTACTTCTTTACTAGCGTCTTTAGCAATTGGCCCAGGCCCAAGTACTTATATGCCACAGAATACAATGATGTGGAGAACTGTATCTCGATCTGTTCCATCACAAGAAACTACAGTGGAAGATGAAGCATTTGAAAAACTACAATCGGGGATAGAGCAATTTACTCTCTCAAGTAATAAATCTGATTCCAGTGAAATGGCTTCTTCTTTGGATGCTGATGGAAACATCCAGCAATTGGATTCTCACATGGTTGCGAAGGAAGCAGAACAGGATGAGGAATCCTATATATACATAAAACTAAAACAATTGACTCTTAATCGCGAAAGTCAAGACCTTTCTTTGTTAAACACTGTGAAAGACATTCCTGACATGAATAATATGAATTTTGCTGAGAAGGGAAGTCAGGAGGCATCAACTGGTTTAGAGAAGAAGGAAGAGAGTCCTCCATTTGAGTATCAACTCATCATAGCCCAGTTGATGCAAGAGGTCAAAGAACTGACAGCTTTCAAGACAACACAAGCTCAGAAGTATTGTTATCTAGAGCAGAAACTGCTGGAGGCAGAATTGGAAATACAACATCTAAAAGATCGCTGTACAACATTAGAAGCTGCATGTAATCTTTCTCTGGGACATGATGAAAAGACAGTTATCCAGTCTTCTGATCAGCAGCATGTAGACCTTAAAGAGTCATTATTTTTAATAGGAGGCTATGATGGAGAATCATTTTTAGCATCTATGGATTTGTATTGTCCTTCTCTGAATGCGATGAAATCTCTAAAGTCTATGAGCTCAGATCGGTCATATGCTTCAGTTGTGCAATTGAATGGTGAGCTCTATGTGTTAGGTGGTGGAAATGGTTGTGTTTGGTATGATATAGTTGAGTCATACAATCCAGTTTGTGACAAGTGGACATCGTGCCCATCTTTGAATCAGAAGAAAGGCAGCTTGGCTGGAGCTGCTTTAAGTGACAAAATATTTGCCATTGGTGGAGGCAATGGAATTGATTGTTTTTCAGATGTTGAGATGCTTGATTTAGATCTAGGACGATGGATCTTTACACGTTCAATGATAGACAAGAGGTTTGCTCTTGCTGCAGTGGAATTCAATGGTATTATTTACGCTACTGGTGGATTTGATGGGAATGACTATCTGCAGTCTGCTGAAAGATTTGACCCCAGGGAACATTCTTGGACCAAAATAGCAAACATGAATACAAAGCGGGGATGTCACTCATTGGTTGTCCTAAATGAAAAGTTGTATGCTTTAGGTGGCTTTGATGGAAATGCAATGGTTTCAAGTGTCGAAGTGTTCGACCCTCGTCTCGGGACGTGGATGATAGGGGAACCCATGAATCAACCTAGGGGATACTCTGCTGCTGCAGTTGTCAATGATTCAATTTATGTGGTTGGGGGAGTCAAAGTTGGTGAGAGCATTTTAGATACAGTTGAGAGTTACAAGGAAGGTCAGGGATGGCAAGAAACCTGCACAACAGTGGTTGGCAAAAGGTGTTTCTTATCAGGTGCTGTCCTGTAG 2016 0.4122 MGAGRKTQTFYAGGIQSISSNSVASSVCGRNLGKNQLGGVIFGCKNATMKECLSKQLFGLPAQHFCYVKNIDPGLPLFLFNYSERKLHGIFEAASRGQMNIDPYGWTTDGSERTQYPAQVQIHVRLQCQPLSEDKFRPIIVDNYYINNHFWFELDHVQTSKLTSLLASLAIGPGPSTYMPQNTMMWRTVSRSVPSQETTVEDEAFEKLQSGIEQFTLSSNKSDSSEMASSLDADGNIQQLDSHMVAKEAEQDEESYIYIKLKQLTLNRESQDLSLLNTVKDIPDMNNMNFAEKGSQEASTGLEKKEESPPFEYQLIIAQLMQEVKELTAFKTTQAQKYCYLEQKLLEAELEIQHLKDRCTTLEAACNLSLGHDEKTVIQSSDQQHVDLKESLFLIGGYDGESFLASMDLYCPSLNAMKSLKSMSSDRSYASVVQLNGELYVLGGGNGCVWYDIVESYNPVCDKWTSCPSLNQKKGSLAGAALSDKIFAIGGGNGIDCFSDVEMLDLDLGRWIFTRSMIDKRFALAAVEFNGIIYATGGFDGNDYLQSAERFDPREHSWTKIANMNTKRGCHSLVVLNEKLYALGGFDGNAMVSSVEVFDPRLGTWMIGEPMNQPRGYSAAAVVNDSIYVVGGVKVGESILDTVESYKEGQGWQETCTTVVGKRCFLSGAVL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0102 671 ProSiteProfiles DCD domain profile. 35 168 IPR013989 -
Bisa06g0102 671 SUPERFAMILY Kelch motif 390 667 IPR015915 GO:0005515
Bisa06g0102 671 SMART dcd 35 168 IPR013989 -
Bisa06g0102 671 PANTHER - 23 667 IPR044832 GO:0034976
Bisa06g0102 671 Coils Coil 345 365 - -
Bisa06g0102 671 Pfam Development and cell death domain 38 165 IPR013989 -
Bisa06g0102 671 Gene3D - 377 668 IPR015915 GO:0005515
Bisa06g0102 671 SMART kelc_smart 579 625 IPR006652 GO:0005515
Bisa06g0102 671 SMART kelc_smart 532 578 IPR006652 GO:0005515
Bisa06g0102 671 SMART kelc_smart 391 437 IPR006652 GO:0005515
Bisa06g0102 671 SMART kelc_smart 485 531 IPR006652 GO:0005515
Bisa06g0102 671 SMART kelc_smart 438 484 IPR006652 GO:0005515
Bisa06g0102 671 Pfam Kelch motif 480 517 IPR006652 GO:0005515
Bisa06g0102 671 Pfam Kelch motif 524 565 IPR006652 GO:0005515
Bisa06g0102 671 Pfam Kelch motif 427 471 IPR006652 GO:0005515
Bisa06g0102 671 Pfam Kelch motif 568 612 IPR006652 GO:0005515
Bisa06g0102 671 Pfam Kelch motif 614 646 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0102 Bisa-ChrBisa06 1957106 1962821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0102 533 636 EF-hand Containing Proteins AT4G39560 31.818 1.00e-07 52.0