Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0097 ATGTATTATAGAAGCTACAGATGTCGGATTCGTTGCCCATTTAGAGGATGGACAAAATTTAGTTGCTATTTGCTAATTGTAGTAAATATTAAAAAACAAAGCCTTGACTCGAAAATTGGCTTTTCCACGGTCAAACATGGCCTAAGCTTCTCAGAAGCAGCTTCCAAGTCTTTAGACTCCATAACCATGCACCCCACAAACTGGGAAATCTCTGAACTTAAAGGCATAATTGATCATCATGTTGGAGTTGACGATTCTGCTACGTTCAACAACTCGTCAAACCCACTTCCTCTTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTTTATTCCATATTTTCCCTTCTCAGCATCTTCAGAGCTCTTGAACTCCCCGAATATTCTCTCGTGGACAAGCGGTTTAATGGAGGACCAACTCCAACCTTCGTCTTCACTCTTTCAATCTTCTTCGTCCATTTTCCAAACGCAGGAACCACACGCATGGAGATTCAACGAACCCACAAAGACCCAAACCGATCTCTCATCAGAAATGGAAGCCAATTCATGTGGATCTTCTTCCTCTTTGAGCATCGCCATTAATGGACCTCGAATTTGCAGAGAAGAACAGAAGAGATCATGTTCAGATTCATCAGTATCAGATGGATACAGGTGGAGAAAATATGGCGAAAAGCAAGTGAAGGGAAGTGAGAATCCTCGAAGTTACTACAAATGCTCGAACCCTAACTGCTCCATGAGGAAGAAGGTTGAGAGGAATTTGGAAGGAGAAATCACAGAGATTGAGTATAAGGGAAGCCACAACCATCCAAAGCCCGAAGCTTGTGGAAGAAATAGTTTGATTCAGTCAATGGCATCGGAAGTACTCTACTCTTCTTCTTGTGCAAATTCTGTTTCTAGGGTTTCTGATACAGCGATGCGTGAGGATGGTTCGGTGTCTGTTGAAGAAGAAGACTGCTTTGAGAGAACATCACAAAGCTGTCATTCCGGAGGAGATGAAGATGTCTTTGGACCTCAGGCTAAAAGATGGAAGGGAGAGAAGAATGAGAATGATGGTGATTTAAGCAGAAGTGTGAAGGAGCCTAGGGTTGTGGTTCAAACAATAAGTGAGATTGACTTACTTGATGATGGCTATAGGTGGAGGAAATATGGCCAAAAAGTTGTTAAAACAAATCCAAATCCAAGGAGCTATTACAAGTGCACATCTCAAGGTTGTGGGGTGAGAAAACATGTAGAAAGAGCAGCAAATGATGCTAAATCTGTGATCACAACCTATGAAGGAAAGCACAACCATGTTGTCCCTCCTTCAAGAGGAAGAAGCTTAGGTTACAACACAAACACAACTTTGCTTAATGGCAATGACGTCGGTGCTAACCCTATTAGGCCCTCTGCTAATTATTCTACCTTCATGAACTCTCCTTACAATGCAAGGCTGCCACCAACATATCCAAGTCCTCAAGAACCGTTTGCCCTAGAAATGTTTCACAACCAAGCTGCAAGTCTAGGGTTTTCGGGATTTGGAAGGTCGACTAGCTCGGACACTGATCGTGTACAAGAAGACAGATATACTAAGTAG 1569 0.4245 MYYRSYRCRIRCPFRGWTKFSCYLLIVVNIKKQSLDSKIGFSTVKHGLSFSEAASKSLDSITMHPTNWEISELKGIIDHHVGVDDSATFNNSSNPLPLPPSSSSSSSSFIPYFPFSASSELLNSPNILSWTSGLMEDQLQPSSSLFQSSSSIFQTQEPHAWRFNEPTKTQTDLSSEMEANSCGSSSSLSIAINGPRICREEQKRSCSDSSVSDGYRWRKYGEKQVKGSENPRSYYKCSNPNCSMRKKVERNLEGEITEIEYKGSHNHPKPEACGRNSLIQSMASEVLYSSSCANSVSRVSDTAMREDGSVSVEEEDCFERTSQSCHSGGDEDVFGPQAKRWKGEKNENDGDLSRSVKEPRVVVQTISEIDLLDDGYRWRKYGQKVVKTNPNPRSYYKCTSQGCGVRKHVERAANDAKSVITTYEGKHNHVVPPSRGRSLGYNTNTTLLNGNDVGANPIRPSANYSTFMNSPYNARLPPTYPSPQEPFALEMFHNQAASLGFSGFGRSTSSDTDRVQEDRYTK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0097 522 ProSiteProfiles WRKY domain profile. 206 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 150 456 IPR044810 GO:0003700
Bisa06g0097 522 MobiDBLite consensus disorder prediction 502 522 - -
Bisa06g0097 522 SUPERFAMILY WRKY DNA-binding domain 210 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 Gene3D WRKY domain 198 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 FunFam WRKY transcription factor 57 358 432 - -
Bisa06g0097 522 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 SMART WRKY_cls 211 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 Pfam WRKY DNA -binding domain 213 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 Pfam WRKY DNA -binding domain 373 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 FunFam WRKY transcription factor 200 271 - -
Bisa06g0097 522 SUPERFAMILY WRKY DNA-binding domain 364 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa06g0097 522 Gene3D WRKY domain 359 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0097 Bisa-ChrBisa06 1800871 1807990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0097 150 505 WRKY Transcription Factor Family AT2G38470 47.230 1.69e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa06g0097 WRKY 6.1e-24 CL0274