Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0052 ATGCGGGACGCATACGCATACGACGTTGCCGTTGAAGAAGAAGAAGCACCGTCGTCGTCCGCGATGGCAAGAGACGCGTGCTTGGGTGTCGTTTTGATGGGGAAATACGAGGTGAAGAGGTTGTTAGGCGTGGGAGCCTTCGCGAAGGTGTATCACGCGATTAATGTGAGCACTGGACAGAGCGTGGCTATCAAGGCCGTGAGCAAGCACAAGGTGTTCAAAGGAGGCCTCACGGCGCAAGTTGAGCGGGAAATCGCTATCATGCGCCGCTTGCGCCATCCCCACACCGTCAAACTCTTCGAGGTCCTCGCCTCCAAGACCAAGATTTACTTCGTCATGGAATTCGCCGGCGGCGGCGAGCTCTACTACAAGGTTGCTCAGGGAAGATTCTCCGAGGATCTCAGCCGTCGCTACTTCCATCAGCTAATCTCCGCCGTCCGGTATTGCCACTCCTCCGGCGTATTCCACCGCGACCTCAAGCTTGATAATCTGTTAATCGACGAGAATATGGACCTCAAGGTTTCGGACTTCGGTTTGAGCGCGCTCAACGACCAGGTCCAACCCGACGGGTTGCTCCACACCGTTTGCGGCACTCCGGCATACGTGGCGCCGGAGATGCTAGCTAAGAAAGGCTACGACGGAGCGAAGGTCGACGTGTGGTCCTGCGGCGTCATCCTCTTCGTCCTCACCGCCGGCTTCTTGCCATTCAACGACCACAGCCTCGCCGTTATGTACAGGAAGATCTACCGAGGGCAATTCCGGTTCCCAAAATGGACGTCGCCGGAGCTCCGGCGGTTTCTGTCGCGGCTGCTGGACCGGAATCCAGAGACGCGGATCACCGTCGAGGAGATCCTTCGGGATCCGTGGTTCAGCAAGGGCTACCGAGAGGTGCAGATCCAGCACAAGGAGTTCGATTTGGATCCGGAGACCCGATCCAAGGGGCTGAACGCCTTCGATTTGATCTCGTTCTCATCCGGGTTCGACATGTCGGGTTTGTTTACCGACCCGGGAGTTCCGGATTGCGTGGAACGCATCGTTTCGGGGGAGAAACCGGAGAGGGTAATGGAGAAGGTGGAAGAGGTGGCGAAGGCGGAGAAGGTGAGAGTGAAGAAGAAGAATGGGTTCGGAGCGAGGCTAGAGGGGCAGAATAGTCATTTAGTGATTCTCGTTGGAATTTACCGGTTAACGGAGAAACTGGTGATCGTTGAAGCAAAGAAAAGGGAGGAAAATGGAGTTGGAAGCGGTCCCCACTTAAAATTTTGGGAGGATAAACTGAGGCCACAGCTTCGAAAATTAGTTTATAAACCGGAAGCACCGGTATTCGGAGACGCCAAATAA 1338 0.5538 MRDAYAYDVAVEEEEAPSSSAMARDACLGVVLMGKYEVKRLLGVGAFAKVYHAINVSTGQSVAIKAVSKHKVFKGGLTAQVEREIAIMRRLRHPHTVKLFEVLASKTKIYFVMEFAGGGELYYKVAQGRFSEDLSRRYFHQLISAVRYCHSSGVFHRDLKLDNLLIDENMDLKVSDFGLSALNDQVQPDGLLHTVCGTPAYVAPEMLAKKGYDGAKVDVWSCGVILFVLTAGFLPFNDHSLAVMYRKIYRGQFRFPKWTSPELRRFLSRLLDRNPETRITVEEILRDPWFSKGYREVQIQHKEFDLDPETRSKGLNAFDLISFSSGFDMSGLFTDPGVPDCVERIVSGEKPERVMEKVEEVAKAEKVRVKKKNGFGARLEGQNSHLVILVGIYRLTEKLVIVEAKKREENGVGSGPHLKFWEDKLRPQLRKLVYKPEAPVFGDAK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0052 445 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Bisa06g0052 445 SUPERFAMILY Protein kinase-like (PK-like) 32 303 IPR011009 -
Bisa06g0052 445 FunFam Aurora kinase A 30 119 - -
Bisa06g0052 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 28 407 - -
Bisa06g0052 445 Pfam NAF domain 315 371 IPR004041 GO:0007165
Bisa06g0052 445 SMART serkin_6 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0052 445 CDD CIPK_C 316 430 - -
Bisa06g0052 445 FunFam Non-specific serine/threonine protein kinase 116 297 - -
Bisa06g0052 445 Gene3D Kinase associated domain 1, KA1 316 435 - -
Bisa06g0052 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bisa06g0052 445 ProSiteProfiles Protein kinase domain profile. 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0052 445 Gene3D Transferase(Phosphotransferase) domain 1 30 315 - -
Bisa06g0052 445 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0052 445 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0052 Bisa-ChrBisa06 782231 783568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0052 32 437 CBL-interacting serine-threonine protein kinases AT5G01820 60.964 4.44e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa06g0052 Pkinase 8.4e-70 CL0016