Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0041 ATGGACACTAAGCTATATACAACACTTAAGCCTCCTTGCACAAAACTTAGCTTCTTCGCTGTGTGCTCCTTTCTGCCTACCATCTGTATGATGCAATTCACCATATTAGCGTTCCTTCTTTTTGCGCCATTCATAGTGCTTTCCGTCGACCCAGTGTTCAACGACGACGTATTGGGGTTGATTGTGTTCAAAGCGGGTCTTCAAGACCCGAAGGCTAAGCTCTCTGGTTGGAATGAAGATGATGATAGTCCCTGCAACTGGGTCGGAGTCAAATGCGACCCGACGACCAATCGGGTCTCTGCTCTGGTCCTGGACGGCTTTTCTCTTTCTGGGCATATTGATCGAGGCCTCTTGAGGTTACAGTTCCTTCAAATCCTCTCACTTTCGAAGAACAACTTCTCTGGGTCCATAAACCCAGAGCTTCCTCGCCTTTGGAACTTGCAAGTTGTGGACTTCAGCGAGAACAACCTCTCTGGGTCTATACCAGAAGGGTTTTTCCAGCAATGTGGGTCTCTGAGAGTAGTTTCATTTGCCAAAAACAATCTTTCAGGTAATATTCCTGATTCTCTAAGTTCTTGTTCCTCATTGGTTTCTCTTAACTTTTCTTCCAACCAGCTTTATGGGAAGTTGCCTTCTGGGATATGGTTTTTGAGGGGATTACAGTCACTTGACCTGTCAAATAACTTGCTGGAAGGAGAGATTCCTGAAGGAATTGAGAATCTGTATGATCTGAAAGAGTTAAGTCTACAGAAGAATCGCTTCATTGGGAGGCTTCCTCGGGATATTGGAGGATGCTTGCTCTTAAAATCAATTGATTTCAGTCATAATTTTCTCTCTGAGACACTTCCTGAGTCAATGCGGAGACTCAGCTCATGCACATCCCTCAGTTTACAGGAGAATTCATTCACAGGGGTCATTCCTGATTGGATTGGAGATTTAAGTAATCTAGAGATGTTGGATCTTTCTGCAAATAGATTTTCTGGTTGGATTCCAAAATCAATAGGAAATCTGAGCTCACTGTATAAACTAAACCTATCCAGGAACCATTTTACTGGAAACTTGCCAGAATCAATGGTAAACTATGTTAAGCTTCTGGCTCTGGACTTCAGCCACAATCAGTTAGAAGGGCATCTTCCTTCATGGATTTTCAGGATGGGTTTACAAAGTGTTTCACTTTCAGGGCACAGCTTCAAAAGCAACTCTCCTTCACTTACCTCCATACCTCCATCTTATCATGGTCTTCAGGTTTTGGATTTGTCTTCAAATGCATATTCTGGTGAACTTCCATCTACCATTGGGAACCTTAGTAGCTTGCAAGTCTTGAATATGTCTACCAACAATATCTCTGGTTCTATTCCTGTGGGTATAGGAGAACTTAAATCTTTATACATTCTTGACTTGGGTGATAACAAGCTTAATGGAAGCATTCCTCCCGAAATTGAAGGGGCATTTTCGCTCAGTGAACTGTGGCTACAGAACAACTTCCTCAGTGGGAAAATTCCAGTCTCAATTGAGAAGTGCTCATCCCTAATATCTCTGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCAGCAGCCATTGCAAACCTGACTAATCTTCAGGATGTAGACTTGTCATGGAATGAACTATCTGGAAGTTTACCTAAGGATCTCACAAATCTTTCCCGCCTTTTATCTTTTAATGTCTCCTACAACCACCTTGAAGGGGAGCTACCGGTGGGAGGCTTCTTCAATATCATCTCTCCCTCAGCCGTCTCAGGTAATCCATCGTTGTGTGGTTCAGTAGTCAATCACTCCTGCCCTTCGGTCCATCCCAAACCTATTGTCCTTAACCCGAATTCTTCTTCCTCAAACTCTAGCACTTCCTTTCCATTCCATGGTCATAAGAAGATCTTACTAAGTATCTCTTCCCTTATTGCTATTGGTGCTGCTGCTTTTATCATCATTGGTGTGGTGGCCATTACTGTCCTAAACATCCATGTTCGTAATTCAATGTCACGTTCTGCTGCCCCATTTGCATTTTCTGGTGGCGAGGACTATAGTTGTTCTCCCGCAAACGATCCAAACTATGGAAAACTAGTAATGTTTTCTGGTGATGCTGGTTTTGATGATGGGGCGCATAATCTCCTAAACAAAGACAGCGAAATAGGTCGGGGCGGATTCGGTGTTGTTTATCACACTGTACTTCGAGATGGGCATTCTGTTGCAATCAAGAAGCTTACGGTTTCCGGTTTGATCAAGTCACAAGAAGACTTTGAGAGGGAAGTGAAGAATCTTGGGACGGTTAGGCACCAGAATCTTGTGGGACTTAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTATTTTTCCAGAGGGAGTTTGCATAAGCTTCTACACGATGAAGACGAATATAGCAGAAACATGCTTTCTTGGCGACAAAGGTTCAAGATTATTCTAGGCATGGCAAAAGGGTTGGCCCATTTGCACCAAATGAACATAATCCACTACAATCTAAAATCAACAAATGTTCTGATCAATTGCTCTGGTGAGCCGAAGATAGGAGATTTCGGCTTGGTCCGGCTGTTGCCAGTTCTGGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGATACATGGCTCCCGAGTTTGCTTGCAGGACAGTGAAAATAACCGAGAAATGTGATGTTTATGGTTTTGGGATCCTGGTTCTGGAGGTGGTGACCGGGAAGAGACCAGTGGAATATATGGAGGATGATGTGGTTGTTCTGTGTGACATGGTAAGAGGTGCATTAGAGGAAGGCCGAGTGGAGCAATGTGTCGATGGGAGGCTTCTGGGTAATTTTGCTGCAGAGGAAGCAATTCCTGTGATAAAACTAGGGCTAATTTGTGCGTCACAAGTGCCTTCAAACCGTCCGGATATGGCCGAGGCAGTTAACATATTAGAGTTGATCCAATGCCCTTCAGAAGGCCAAGAGGATTTAGAATGA 2991 0.436 MDTKLYTTLKPPCTKLSFFAVCSFLPTICMMQFTILAFLLFAPFIVLSVDPVFNDDVLGLIVFKAGLQDPKAKLSGWNEDDDSPCNWVGVKCDPTTNRVSALVLDGFSLSGHIDRGLLRLQFLQILSLSKNNFSGSINPELPRLWNLQVVDFSENNLSGSIPEGFFQQCGSLRVVSFAKNNLSGNIPDSLSSCSSLVSLNFSSNQLYGKLPSGIWFLRGLQSLDLSNNLLEGEIPEGIENLYDLKELSLQKNRFIGRLPRDIGGCLLLKSIDFSHNFLSETLPESMRRLSSCTSLSLQENSFTGVIPDWIGDLSNLEMLDLSANRFSGWIPKSIGNLSSLYKLNLSRNHFTGNLPESMVNYVKLLALDFSHNQLEGHLPSWIFRMGLQSVSLSGHSFKSNSPSLTSIPPSYHGLQVLDLSSNAYSGELPSTIGNLSSLQVLNMSTNNISGSIPVGIGELKSLYILDLGDNKLNGSIPPEIEGAFSLSELWLQNNFLSGKIPVSIEKCSSLISLILSHNKLTGSIPAAIANLTNLQDVDLSWNELSGSLPKDLTNLSRLLSFNVSYNHLEGELPVGGFFNIISPSAVSGNPSLCGSVVNHSCPSVHPKPIVLNPNSSSSNSSTSFPFHGHKKILLSISSLIAIGAAAFIIIGVVAITVLNIHVRNSMSRSAAPFAFSGGEDYSCSPANDPNYGKLVMFSGDAGFDDGAHNLLNKDSEIGRGGFGVVYHTVLRDGHSVAIKKLTVSGLIKSQEDFEREVKNLGTVRHQNLVGLKGYYWTSSLQLLIYEYFSRGSLHKLLHDEDEYSRNMLSWRQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLINCSGEPKIGDFGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEAVNILELIQCPSEGQEDLE 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0041 996 SUPERFAMILY L domain-like 72 406 - -
Bisa06g0041 996 Pfam Leucine rich repeat 413 472 IPR001611 GO:0005515
Bisa06g0041 996 Pfam Leucine rich repeat 293 350 IPR001611 GO:0005515
Bisa06g0041 996 Pfam Leucine rich repeat 485 544 IPR001611 GO:0005515
Bisa06g0041 996 SUPERFAMILY Protein kinase-like (PK-like) 713 986 IPR011009 -
Bisa06g0041 996 SMART LRR_sd22_2 217 240 - -
Bisa06g0041 996 SMART LRR_sd22_2 531 557 - -
Bisa06g0041 996 SMART LRR_sd22_2 313 339 - -
Bisa06g0041 996 SMART LRR_sd22_2 459 482 - -
Bisa06g0041 996 Pfam Leucine rich repeat N-terminal domain 54 93 IPR013210 -
Bisa06g0041 996 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 705 787 - -
Bisa06g0041 996 SUPERFAMILY L domain-like 313 581 - -
Bisa06g0041 996 Gene3D Ribonuclease Inhibitor 331 607 IPR032675 -
Bisa06g0041 996 SMART LRR_typ_2 531 554 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 241 265 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 435 457 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 313 336 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 555 579 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 337 361 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 144 168 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 217 240 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 459 483 IPR003591 -
Bisa06g0041 996 SMART LRR_typ_2 362 385 IPR003591 -
Bisa06g0041 996 Pfam Protein kinase domain 712 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0041 996 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 788 991 - -
Bisa06g0041 996 Gene3D Transferase(Phosphotransferase) domain 1 788 994 - -
Bisa06g0041 996 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 333 605 - -
Bisa06g0041 996 Gene3D Ribonuclease Inhibitor 53 330 IPR032675 -
Bisa06g0041 996 ProSiteProfiles Protein kinase domain profile. 711 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0041 996 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 54 332 - -
Bisa06g0041 996 Gene3D Phosphorylase Kinase; domain 1 705 787 - -
Bisa06g0041 996 Pfam Leucine Rich Repeat 220 241 IPR001611 GO:0005515
Bisa06g0041 996 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Bisa06g0041 996 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 217 332 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0041 Bisa-ChrBisa06 605884 613745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0041 33 995 Receptor kinase-like Gene Family AT3G56370 62.358 0.0 1133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bisa06g0041 Pkinase 6.6e-41 CL0016