Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa05g2998 | ATGGCATCATCATCGAGCAGTGGACTGACATTCAAGCTGCACCCTTTGGTGATAGTCAACATATCGGATCATTATACTCGGGTTAAGTCACAAATGAACCCACCCATTGCAGCCCAACACAGAAGCACCGCCTCTGCCAACACCAATGGTGCTGACGGATTGGCGTCCCCACCCCCGCGGGTGTATGGATGCGTGATAGGTGTGCAGAGAGGACGTACTGTGGAGATCTTCAATAGCTTTGAACTTCTTTATGATCCTTCTACCCATTCCCTCGACCGTTCTTTTCTCGAGAAGAAGCAAGAGCTCTACAAGAAGGTTTTCCCCCACTTCTACATACTCGGATGGTATTCGACTGGGAGTGATGCTCAGGAATCAGATATGCATATTCATAAAGCTAGTCTGCAGTGA | 408 | 0.4853 | MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPIAAQHRSTASANTNGADGLASPPPRVYGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKASLQ | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa05g2998 | 135 | ProSiteProfiles | MPN domain profile. | 38 | 135 | IPR037518 | - | |
| Bisa05g2998 | 135 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | 3 | 132 | - | - | |
| Bisa05g2998 | 135 | MobiDBLite | consensus disorder prediction | 33 | 54 | - | - | |
| Bisa05g2998 | 135 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 7 | 132 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
| Bisa05g2998 | 135 | MobiDBLite | consensus disorder prediction | 33 | 52 | - | - | |
| Bisa05g2998 | 135 | Gene3D | Cytidine Deaminase, domain 2 | 1 | 135 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa05g2998 | 2 | 130 | Eukaryotic Initiation Factors Gene Family | AT2G39990 | 28.030 | 5.20e-06 | 42.7 |