Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2977 ATGAAATTTACAGAAAGCAGCAGCTACTTCATTCAGCTCCATCTTCACGATCATCTTCTTCCCCTCACTTCTTATACCGAGATTCAGAAGAGTGCAGGCCTTCTTCTTCGTCGATTCCTCCGAGCTTCAGTCTGTCGTTCCAAATTTTCACTGACATCCCTCCTCTCTCAACTGAGACTCAAATTTAACATGGAGTTTACTCCCCATGACTCTGCATTATTTGGTGTGAGGTTTCAGATTGTAATTAATCTGCACGATGTTGCAATGGATGGGAGGTTCAAGGCGGAAAGTGACAACTGTTTTTGTTCTGATGTCCAAACATTTTATTTGGTGCATGATATCTCTTATGCTGAAATGGGGAAATTTCAGTCAAGGAAGTCTACACAGAAAAGGCAAAAGCAATACTTTGAACAAAGGAAACGCCAACAACAGAATCTGCAGATAACAGGGTCAGAGGGCTGTTCTGATATTCAGGGCATAAGTGGGCAGTGCCTAAAAGAACATAGGTCTCTGGATATTCTCAATTTGCTAAACTTGTCAACAAAGGCTCAGGAATGTGACTTTGCCTTCCTGAAAGGAGCACCATTCGGCTGCCAAAGAGAAGCATCACCAAAGGAGGTTCTAGTAAGTCCTGCTGATTATCAGAATGATGATCTTGATGATTATCAGAATGGTGATCTCAATGGGAAAGCTTGTAAACCAAGTGACTGGAAGACAGTAACTGATCAACACTTGGGATCATCTGTTCTTGATTTGCTTTATGATGATGGGCCTAATGTTGCTGTGGAAGAGAGCCCTACCTTTGAAGACCATGTTGCTTTCTCACTCGAAGGTTTGGGTAAAGTTGGAACAGAGACACCAGGTCATACGCCACAACAACTGAACAGAATCCCTTATGGTTACACCCCCTCATTGAAGTGCCGAAAGAAAAAGTTGTCAAAGGATGTTAACCATGTCCTGGAAGATATTGAGCTTGAAGTGGATACGATGATGGAAGATATCAGGGTTGCCCCTATCAGCAGTTTCTCAAACTTCCCTTATAACGAAGGAAAGCAAAGTTTAGCAACTGCTCAAGACTACAAGCATTTCAATGACCATGATAATGAAAATGATTCTCGAGACTACAAGCATTTTAATGACCATGCTACTAAAATTGGTTCTTCCATCAGCCAAGAATTCTTCTTCAACAGTGAGAATAATAATGATAACATATGGAATGTACCTAGTTCTAGCTTCCTTGATGAGAAGTTTGACAATGAGAGGGAATATAATGCCTCGTGGAAGAAAAAGACATTTCAAATGGGTATTAGTTCTATGGATTTATTGAAAAGTGGGGCCTTCAAAATGGCAAGTTATGCATCTGAAGATCGCCTGCCAAAGAAAAGATCTTCAGCAACAGCAGCAATGGAAGGATTCGATAAGATTGAGTTACCAGCTTCATATTCCAAACACCAATCAGAAAATGATTATGACTTTTTTGTTTCTAGTGGGGAAAGATCAGATGGGAACTTCAATGTCCAAAGTTTAGTCCCGGAAGATGTACGGGACAATTCAAGCTTGCTAAGTGAAGAGTCATGCTCATCCACTGCAGTGAGGGGTGAGGCAATCATTCATTCACCATCAAGATCAGTAACAGGAGAGAACAGTAAAGAAAACAAATATGCTTTTGCAAGCCCTGGAAATAAGTGCAGATCTAAAGAAGTAAAATTTACCAGTGTGTCAAATTCATCAAAGCGAAAACCATCTCATTATTCAAATTCTATTCTTGTGGAAGAGTTGGGTGCACATAACAGCAGGCAGTTTAAGGAGAGATATGCTTCGGCTAATATAAATTCAGGTGACACTTCATTATGTCAAAATTTAGAGACGGAGTTTGAAGTCTTCGGATCCAATAATAGAACTGAAGATCCTTTAAGCATCTTTACTACCCCTGAGTTCCATGACAAGCCCAGTCCTTCCTTTAGTGGATTAAAAAATGGTTCAAATGTTGCTGATTCTCCTCCTAGCAGTTTTACCCCCGAGAAATCTGCATTTGGTGATTCAACTGTGTTCTCAGATTTTCGATCATGGCCAACCAACCCCAGTTTTTCTCCAAAATTTGAATTGAAAGGTAATCAAAAAGATGTTGCCGGTTTCCATAGTGGGACACCATGTCCTGATTTGTCAGTACAGAAAAGTGTTAAAGATGAGTTAAAAGGGAAACTGCATCAAGACAGCCACGTAAATTTTGAGCTAACAGAAGAAATCTTCATGGGGAACAAAGGATGGTCCACAGAAAAGAAAATGGTAGGAGATACTTCAACTTCCAGTAACTGTACTCAAGATTTTGAAGGGGAAAAAGACCCCAATGCAATGATTACACAGAGTCTTGAGACAATTGGCCATGTGGAGGAGATATCATCATCACCGATTAAACCTGACAAAAATGAAAGAAAAGTAGATAAAACAAAGGAAACTGTCAATTTCAGCAGGAACAATTGTGATGCTGAAATTCCTATCAAATATAAAATTGCAAATGAAGCTTCTCTGCGTTCAGAAGGTATTGATGTAGGCATCTCTGATAGACCATCAAGAAGGCATGACGCCTTGCTACAATCTGATAGCTATAAGGTTAGTCCAAAATTTGATGGCTTTATGTATAGGATTTTCATAGGGGTTAGGTCCAGAGCTCATCTTGATTTTGACTTTGTTGATTTTGTGCTCCAAATGAGTCTGTCGGGAGTGTGGTTTGGAGTTTGGTTTAGCAGGAAGAGTATACCTAACAACATGACAGGTGCATCTATCAAAGAGAGGAAAGATTTTCCTCGGGCTTTTGACTGTGATGGATGCTGCATTCTTTTTTCTTTGAAGGATGTTTCCATATTTTCTCTTAAGGGCTATTATCCACAACTTGTTGCTGTTTGTTCCATCTCTGAATCTCTCCGAGTTGTTTACCTTGTAAAGCTAATTGGAATATATATGGATGAATCTCAACAATCTCTGGTGGTACGAGGATTTGATTTAGGATTAATGGGGTCCGACATTTGTGTCAATGTTTCGTGTGGGGTGGAAAATGCCCATGAATGGAAGAAGGGGTGGCCCCTGCGATCTGGCGGATTCGCCAAACTCTGCGACAAGTGTGGATCTGCCTATGAAAATTCAGTTTTCTGTACAAGGTTCCACCTTGAAGAATCTGGTTGGAGGGAATGCAACTTCTGCAACAAACCAATACACTGTGGATGCATAGTTTCTAAGTCTTTGTTCGAGTACCTTGATTTTGGTGGTATAGGTTGTATTAGCTGTGTAAAGTCCCCCCAACTTCATTTGATGCAAAATACTGGAACTTCTAATGGTTCTATAACATCAACCAAATATGTTGCAAGTGACCAACATTCTTCTCATATTGATGGTAGACTCTTAGTGGATAGTGTTGATGAAGGAAAACTTATGCAACTCTGCAGAGTTGTTGAAGCTAGTGAATCTAGCCATTGGCCTCAAGCACAGAGAGATGGAATGATTTTGTCTAGTGGCCAAAACAGCCAAGAAGTTAAGTGTCCAATCAGGGAAGTGGATGCAGGATTTTCAAATGTGATGAATCCCTCTGTTCAGGCATTAACATTTGCTGCATTAGAAAATAGTAGACTGACATGGGAGGTAAAAAATATGCACGAACCATTGGCACAGCCATCTTTGAGTATGTCTTTAGGAACTCCATCATGCAACTCTGTCCTGCCTTCTGCTGGGGAGATCATAGAAGGAAAAGGTGAAGAAAAACCATCTCCCTTTCATCAAGGGCAAAGATCTCGGCCTATATTGCCTAAACCATTGAAAACTGGGCTTACCCTGAACCAAGAGTCAAATAAAGGCATGATGTCTCAGGCACGCATAGCCCGGCCACCTGCCGAGGGAAAAGGCAAGAATCAGTTACTTCCTAGATATTGGCCCCGGATCAGTGATAAAGAGCTGGAGCAATTGTCTGGAGATTTGAAGTCCACTGTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGACGCAGGTCGAATTGGCCGTCTTGTTCTTCCAAAAGCATGTGCTGAAGCTTATTTTCCTCCCATTTCTCAATCAGAAGGTCTTCCATTGCGGATTCAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTTCGATTTTGGCCTAACAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCCATGCAATTGCGGGCGGGTGATACTGTAATATTTAGTCGGATAGATCCTGGGGGCAAACTTGTTATGGGTTTCAGAAAGGCATCTAATTCTGTAGATACACAGGATGCCTCTATGTCCGCACCTTCTAGTGGCATTTCAATGAAGGAAACAACTTTTCCTGCGGCCACTGAGAATATTGCCTCAGGAAATAGTTATTCTACTCTTCTCCAGCCAATGAAGGGAAACAGGGAATCTCACTTAAATGGACTTTCTGAACATCTGCATTTAAACAGTGTGGATGCTGGTTTGCCTAAGACCGAAAATTGTGGGGACATAGCAAACAATGATTCACTGCAGCAACCAATTTCTGTTTCAGAGAAGAAGAGGACTCGGAATATTGGACCTAAAAATAAGAGGTTGCTCATTCATAGTGAAGATGCTCTGGAGTTGAGACTTACATGGGAAGAAGCACAGGATTTACTTCGTCCACCGCCTAGTGTTAAGCCAAGCATTGTCGCAATTGAGGATCACATATTTGAAGAATATGATGAACCTCCGGTTTTTGGAAAGAGAAGTATATTCAGTACTCATTCATCTGGGAGACAGGAACAATGGACTCAATGTGATGATTGCTCTAAATGGCGAAGGCTGCCCGTTGATGTTCTACTTCCTCTTAAGTGGACATGTTCAGAAAATGTCTGGGACGCAAGCAGGTCTCTGTGTTCTGCGTCAGAGGAGCTGACTCCAAAGGAGTTGGAAAACCTTTTGAGAACTAGTAAAGATTTTAAGAAGAAAAGAATTGCATATAACAGTAAGTCACACCAAGAACGTGAACATTCCGGCTTAGATGCTCTAGCCAGTGTGGCAGTTTTAGGGGATAATCTTCTTGGCCCTGGTGAGTCCTCGGCTGGAGTCACGACCAAACATCCTAGACACCGTCCGGGATGCACTTGCATAGTCTGCATCCAGCCACCAAGTGGGAAGGGGAGACACAAACCGACCTGTACTTGCAACGTGTGCATGACTGTGAAGCGCCGTTTCAAAACCCTTATGATGCGTAAGAAGAAACGCCAATCAGAGCGTGAAGCAGATGCTGCCCAGAAGGAACAAAGCCGGCAGAGGGATGAATCAGAAACGAATGGAGCATCAAGAGAGAATACGAATTGTTTGGAAAAAGAAGGGGGCCTAATCAGAGGTCAGCCTGAGGTTGGTGAACCCAGTGGGGGACAAATAGATTTGAATTGTCATCCCAATCGCGAAGACATGCAAGTTGATGTTCATCTTGAAAGCACAAACTATCTGTTATAG 5496 0.4189 MKFTESSSYFIQLHLHDHLLPLTSYTEIQKSAGLLLRRFLRASVCRSKFSLTSLLSQLRLKFNMEFTPHDSALFGVRFQIVINLHDVAMDGRFKAESDNCFCSDVQTFYLVHDISYAEMGKFQSRKSTQKRQKQYFEQRKRQQQNLQITGSEGCSDIQGISGQCLKEHRSLDILNLLNLSTKAQECDFAFLKGAPFGCQREASPKEVLVSPADYQNDDLDDYQNGDLNGKACKPSDWKTVTDQHLGSSVLDLLYDDGPNVAVEESPTFEDHVAFSLEGLGKVGTETPGHTPQQLNRIPYGYTPSLKCRKKKLSKDVNHVLEDIELEVDTMMEDIRVAPISSFSNFPYNEGKQSLATAQDYKHFNDHDNENDSRDYKHFNDHATKIGSSISQEFFFNSENNNDNIWNVPSSSFLDEKFDNEREYNASWKKKTFQMGISSMDLLKSGAFKMASYASEDRLPKKRSSATAAMEGFDKIELPASYSKHQSENDYDFFVSSGERSDGNFNVQSLVPEDVRDNSSLLSEESCSSTAVRGEAIIHSPSRSVTGENSKENKYAFASPGNKCRSKEVKFTSVSNSSKRKPSHYSNSILVEELGAHNSRQFKERYASANINSGDTSLCQNLETEFEVFGSNNRTEDPLSIFTTPEFHDKPSPSFSGLKNGSNVADSPPSSFTPEKSAFGDSTVFSDFRSWPTNPSFSPKFELKGNQKDVAGFHSGTPCPDLSVQKSVKDELKGKLHQDSHVNFELTEEIFMGNKGWSTEKKMVGDTSTSSNCTQDFEGEKDPNAMITQSLETIGHVEEISSSPIKPDKNERKVDKTKETVNFSRNNCDAEIPIKYKIANEASLRSEGIDVGISDRPSRRHDALLQSDSYKVSPKFDGFMYRIFIGVRSRAHLDFDFVDFVLQMSLSGVWFGVWFSRKSIPNNMTGASIKERKDFPRAFDCDGCCILFSLKDVSIFSLKGYYPQLVAVCSISESLRVVYLVKLIGIYMDESQQSLVVRGFDLGLMGSDICVNVSCGVENAHEWKKGWPLRSGGFAKLCDKCGSAYENSVFCTRFHLEESGWRECNFCNKPIHCGCIVSKSLFEYLDFGGIGCISCVKSPQLHLMQNTGTSNGSITSTKYVASDQHSSHIDGRLLVDSVDEGKLMQLCRVVEASESSHWPQAQRDGMILSSGQNSQEVKCPIREVDAGFSNVMNPSVQALTFAALENSRLTWEVKNMHEPLAQPSLSMSLGTPSCNSVLPSAGEIIEGKGEEKPSPFHQGQRSRPILPKPLKTGLTLNQESNKGMMSQARIARPPAEGKGKNQLLPRYWPRISDKELEQLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVIFSRIDPGGKLVMGFRKASNSVDTQDASMSAPSSGISMKETTFPAATENIASGNSYSTLLQPMKGNRESHLNGLSEHLHLNSVDAGLPKTENCGDIANNDSLQQPISVSEKKRTRNIGPKNKRLLIHSEDALELRLTWEEAQDLLRPPPSVKPSIVAIEDHIFEEYDEPPVFGKRSIFSTHSSGRQEQWTQCDDCSKWRRLPVDVLLPLKWTCSENVWDASRSLCSASEELTPKELENLLRTSKDFKKKRIAYNSKSHQEREHSGLDALASVAVLGDNLLGPGESSAGVTTKHPRHRPGCTCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREADAAQKEQSRQRDESETNGASRENTNCLEKEGGLIRGQPEVGEPSGGQIDLNCHPNREDMQVDVHLESTNYLL 1831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2977 1831 CDD B3_DNA 1328 1429 IPR003340 GO:0003677
Bisa05g2977 1831 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1006 1820 - -
Bisa05g2977 1831 SUPERFAMILY DNA-binding pseudobarrel domain 1328 1430 IPR015300 -
Bisa05g2977 1831 FunFam B3 domain-containing transcription repressor VAL1 1308 1435 - -
Bisa05g2977 1831 Gene3D - 1308 1435 IPR015300 -
Bisa05g2977 1831 MobiDBLite consensus disorder prediction 1245 1270 - -
Bisa05g2977 1831 Pfam CW-type Zinc Finger 1600 1642 IPR011124 GO:0008270
Bisa05g2977 1831 MobiDBLite consensus disorder prediction 1747 1814 - -
Bisa05g2977 1831 MobiDBLite consensus disorder prediction 651 675 - -
Bisa05g2977 1831 Coils Coil 1752 1772 - -
Bisa05g2977 1831 SMART B3_2 1330 1431 IPR003340 GO:0003677
Bisa05g2977 1831 Pfam B3 DNA binding domain 1330 1429 IPR003340 GO:0003677
Bisa05g2977 1831 Gene3D - 1590 1644 - -
Bisa05g2977 1831 ProSiteProfiles B3 DNA-binding domain profile. 1330 1431 IPR003340 GO:0003677
Bisa05g2977 1831 MobiDBLite consensus disorder prediction 1751 1777 - -
Bisa05g2977 1831 MobiDBLite consensus disorder prediction 541 555 - -
Bisa05g2977 1831 ProSiteProfiles Zinc finger CW-type profile. 1595 1645 IPR011124 GO:0008270
Bisa05g2977 1831 MobiDBLite consensus disorder prediction 537 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2977 Bisa-ChrBisa05 71451730 71480626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2977 1004 1820 B3 DNA Binding Superfamily AT2G30470 50.790 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa05g2977 B3 2.2e-15 CL0405