Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2968 ATGGAGAATAAACCAAATATCTTAATGGAAAGATATGAATTAGGAAGGTTACTAGGCCAAGGTACCTTTGCAAAGGTATACTATGCTAGGAGTACAACAACTAACCAGAGCGTGGCTATTAAAGTGATAAACAGGGAGAAGATTCTGAGATCAGGGCAAGCTGATCAGGTCAGGCGCGAAATAGCTATTATGAGACTTGTGAGACATCCCAATATTATACAGCTTTACGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATCGAATATGCTAAAGGTGGTGAGCTCTTTAACAAGGTGGCCAAAGGGAAGCTAAAGGAAGACTGTGCTCATAAATATTTTCAGCAGCTTGTCAATGCAGTAGATTTTTGTCATAGTAGAGGTGTTTACCACCGTGATATAAAACCGGAGAACCTTCTGTTGGATGACAATGGGAACCTAAAGGTCTCCGATTTTGGGTTGAGTGCTCTGGCTGAATCCAAGAGGCAGGATGGCTTACTGCATACACCTTGTGGCACACCTTCCTATGTTGCTCCTGAACTCATCAGAAGGAAAGGTTATGATGGGGCCAGAGCTGATACTTGGTCTTGTGGAGTAGTTCTGTTCGTCTTATTGGCAGGTTATCAACCTTTTCATGATGCAAATTTGATAATGATGTATAGGAAGATTACCAGGGCAGAATATAAATTCCCTAATTGGTTCTCCCCAGAAGTACGTAGACTATTAATTAAGATATTGGATTCAAATCCTGAAACTAGGATTCCCATAGCTAAGATTAAGGAATGTTCTTGGTTTATGAAAGGGCCAGCTGCTAGATATAAAAAACCTGAATGGGGAAGCAAGACTGTCTCTACTTCAGGTCTAAAGCATTGTGATAAAACCAATGAAAGTGATAGTAGAGCAGGAACAAAGCAGGAGTCAATTGTGCCTATAAGTATAAATGCTTTTGATATCATCTCCCGTTCTGCTGGTTTTGATCTATCTGGATTCTTTGAAGACAGATTTCAGAAGGGAGAAGAAAGATTTTCTTCAAGGAAACCAGCCCCAGTAATCATCTCCAAGCTGGAAGAAATTGCTAAGCGTCTGAGGTTGAAAGTAGAGAAAAGAGATCCAGGTTTGTTGAAATTGGAGGGCCTCAAGGAAGGTAGGAAGGGGATTTTATCCATTGATGCGCAGATCTGTGAGGTCACTCCAACTTTCCATTTGGTTGAGATGAACAAAGCTGATGGAGATACATTAGAATATCAGACTTTATTGAGGGAGGATATTAAGCCCGCTCTTAAGGATATTGTTTGGGTTTGGCAAGGGGACCAGCAAAACCAATTAGAGCAGTAA 1338 0.4081 MENKPNILMERYELGRLLGQGTFAKVYYARSTTTNQSVAIKVINREKILRSGQADQVRREIAIMRLVRHPNIIQLYEVMATKSKIYFVIEYAKGGELFNKVAKGKLKEDCAHKYFQQLVNAVDFCHSRGVYHRDIKPENLLLDDNGNLKVSDFGLSALAESKRQDGLLHTPCGTPSYVAPELIRRKGYDGARADTWSCGVVLFVLLAGYQPFHDANLIMMYRKITRAEYKFPNWFSPEVRRLLIKILDSNPETRIPIAKIKECSWFMKGPAARYKKPEWGSKTVSTSGLKHCDKTNESDSRAGTKQESIVPISINAFDIISRSAGFDLSGFFEDRFQKGEERFSSRKPAPVIISKLEEIAKRLRLKVEKRDPGLLKLEGLKEGRKGILSIDAQICEVTPTFHLVEMNKADGDTLEYQTLLREDIKPALKDIVWVWQGDQQNQLEQ 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2968 445 Gene3D Kinase associated domain 1, KA1 317 434 - -
Bisa05g2968 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bisa05g2968 445 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2968 445 SUPERFAMILY Protein kinase-like (PK-like) 8 279 IPR011009 -
Bisa05g2968 445 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2968 445 Pfam NAF domain 311 369 IPR004041 GO:0007165
Bisa05g2968 445 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2968 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 428 - -
Bisa05g2968 445 CDD CIPK_C 315 429 - -
Bisa05g2968 445 FunFam Non-specific serine/threonine protein kinase 6 306 - -
Bisa05g2968 445 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bisa05g2968 445 Gene3D Transferase(Phosphotransferase) domain 1 3 316 - -
Bisa05g2968 445 FunFam Non-specific serine/threonine protein kinase 310 433 - -
Bisa05g2968 445 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Bisa05g2968 445 MobiDBLite consensus disorder prediction 285 304 - -
Bisa05g2968 445 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2968 Bisa-ChrBisa05 71303338 71304675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2968 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 64.602 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa05g2968 Pkinase 3.3e-73 CL0016