Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2955 ATGCCTTCAACTGCTCTTCAATGGCTGAGCCTTGTGGGCATAATTTGGCTCCAAGCCATCAATGGCACAAACACCAATTTTCCTGCTTACTCCTCACAGCTGAAGGAACTCCTTTCCATATCTCAGCTGGAGCTCAATAACTTGGCTTTTGCCTCTGATGCCGGGAAACTTTTCGGTTGGTTGTCCGGCATGGCTGCTGTCTATCTCCCCCTTTGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATAGGTTATGGTGTGCAGTATCTATTCATAACAAATCAAATTTCCTCGCTCTCCTATTGGCATGTCTTCTTCCTAACTGTTCTGGCAGGGAATAGCATTTGTTGGATTAACACTGTCTGCTATGTCGTCACAATCAGGAACTTCCCATCTGATCGCCAAGTTGCTGTGGGGTTATCAACTAGTTACCAAGGATTAAGTGCAAAGATTTACACCGATGTTGTTGAAGCTGTTTCTCCACACAAAAAGGCTAGAACCTTTCTTTTACTGAACTCCATCAGTCCTCTGATAGTTAGCCTAATGGCAGCTCCTGTAATTAGAGAACCTAAACACACTGGGTCTACACGCATGGGTGTTGGCTTTGTTATAATGTTTGTCATTACAATATGCACTGGAATATATGCTGTGATGACCAGCTTGCAATTTGTGTCAGGAAAGTTATCCCCACTGAGTAGTCTGATTGGTATTCTAGTGTTTCTTCTCCTTCCTTTGTTAGTTCCAGTTTCAGAGAAGATCAAGGAATTAGTGGGGTCATGGAAAACAAATAGAGAGAGGCTAAGAGTCTATCATTTCACTGTGGAAGAGAGCACTAATGAAGAGAGGACAGAGAATGAGGTAAAGGAGGGAGAAGACAGCAGAGAAGTTCATGAAGTCGGTGTAAGAGAAGAGATTGGAGTGAAGGTGATGCTTAGAAGAGTAGATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCCACAGTTGGTTTGGTGTATCTGAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGTTCCGGCACTTCATCATTGGTTTCATTGTCTTCATCTTTCGGTTTCTTTGGCCGTCTCATTCCTTCTTTCATGGACTACTTCTACAGGGGTAGGCGTACAATTTCAGGGCCAGTTTCTATGGTGGCATTGATGGCTCCAACAGCTGCAGCATTCTTCTTACTTCTGAATCAAACAGACGCTGCTCTGTACTTCAGTACAGCCATAATTGGAGTGTGCACTGGGGCCATCACTTCCATTTCTGTGTCCACAACCACTGAGCTTTTTGGCACAAAAAATTTCTCTGTCAACCACAATGTGTTAGTCTCCAACATTCCCTTTGGCTCCTTCCTCTTTGGTTTCTCAGCTGCTCTTCTGTACCGTAAGGAAGGAGATGGACACGCAAAATGCATAGGCATGGAATGCTACAGAGCCACTTTCATCATCTGGGGTTCTCTCTGTTTCTTTGGGACTTTCTTGGCTTTGATTCTACATGCCAGAACTCGCAAATTTTACTCACAGAAACAATAG 1548 0.4348 MPSTALQWLSLVGIIWLQAINGTNTNFPAYSSQLKELLSISQLELNNLAFASDAGKLFGWLSGMAAVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFFLTVLAGNSICWINTVCYVVTIRNFPSDRQVAVGLSTSYQGLSAKIYTDVVEAVSPHKKARTFLLLNSISPLIVSLMAAPVIREPKHTGSTRMGVGFVIMFVITICTGIYAVMTSLQFVSGKLSPLSSLIGILVFLLLPLLVPVSEKIKELVGSWKTNRERLRVYHFTVEESTNEERTENEVKEGEDSREVHEVGVREEIGVKVMLRRVDFWLYFFVYFFGATVGLVYLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSFMDYFYRGRRTISGPVSMVALMAPTAAAFFLLLNQTDAALYFSTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVLVSNIPFGSFLFGFSAALLYRKEGDGHAKCIGMECYRATFIIWGSLCFFGTFLALILHARTRKFYSQKQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2955 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 512 - -
Bisa05g2955 515 Gene3D MFS general substrate transporter like domains 171 507 IPR036259 -
Bisa05g2955 515 SUPERFAMILY MFS general substrate transporter 5 509 IPR036259 -
Bisa05g2955 515 CDD MFS_Mch1p_like 6 497 - -
Bisa05g2955 515 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2955 Bisa-ChrBisa05 71014772 71017153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2955 1 514 Nodulin-like Gene Family AT2G30300 50.566 3.26e-160 463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0404 09 5817961 5819810 Bisa05g2955 05 71014772 71017153 CCT
Bisa05g2955 05 71014772 71017153 Bisa05g2955 05 71014772 71017153 ECH