Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2943 ATGCAGACATTAATCAGAAGAAGAAGGTTTGATGATGGGTACAATTGGAAGAAGTACGAGGAAAAACTAATGAGAGGGAGTGAGAAGCATAGCAGTTACTACAAATGCACAATCCCAAATTGCCCAGTGAAGAAGAGAGTTGAGAAAACTATGGATGGACATATTAGTGAGGTAGTTTATAAGGGTACTCATAACCATGGTAAACATTGGCTTACAATGACGAGAAACTTATCATTTGAATCTGTTCATCCCAATGATGAAACCCCATATCAATCATTGGAGTTTCCGGAATATGAACAGTTGGATTCGGATGACACACCAGAGAAGTCATCAATATCATGGACTAATGAAATTTCAAACCCTGATAGTACTGTTTCACTGTGCTTTTCCAATTCCCATTTTGAAAACTTGTCTGGCTCTGACAATTTCACCATCTCACAAGCCATTAGAGCAGAAGACCATTTACTATTAGAAATTGACACTGTAAGAGGAGGTGATGATAGGGTCAGAAGTCATCTTCATTACCAGAAAATGCAGACATTAAGCAGAAGAAGAAGGTTTGATGATGGGTACCATTGGAGGAAATATGAGGAAAAGCAAGTGAGAGGAAGTGATAAGCGTAAGAGTTACTACAAATGCACACTCCCAAATTGCCCAGTAAAGAAGAGAGTTGAGAGATTCACAGATGGGCAGGTTAGGGAGGTTGCTTATAAGGGTGTTCATAACCATTGCAAGCGTGAGCTCCCATTGATGAGAAACTTTTCATTTGAATCTGTTCATCCCAACGATGAAACCCCATGTCAATCATTGGAGTTTCAGGAATATGAGCAGTTGGATTTGGATGACACACCAGAGAACTCATCAATGTCAATATTAGAGCTCAGGTAG 888 0.3964 MQTLIRRRRFDDGYNWKKYEEKLMRGSEKHSSYYKCTIPNCPVKKRVEKTMDGHISEVVYKGTHNHGKHWLTMTRNLSFESVHPNDETPYQSLEFPEYEQLDSDDTPEKSSISWTNEISNPDSTVSLCFSNSHFENLSGSDNFTISQAIRAEDHLLLEIDTVRGGDDRVRSHLHYQKMQTLSRRRRFDDGYHWRKYEEKQVRGSDKRKSYYKCTLPNCPVKKRVERFTDGQVREVAYKGVHNHCKRELPLMRNFSFESVHPNDETPCQSLEFQEYEQLDLDDTPENSSMSILELR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2943 295 SMART WRKY_cls 10 68 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 SMART WRKY_cls 187 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 Pfam WRKY DNA -binding domain 188 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 Pfam WRKY DNA -binding domain 11 66 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 SUPERFAMILY WRKY DNA-binding domain 3 67 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 Gene3D WRKY domain 173 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 Gene3D WRKY domain 1 68 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 ProSiteProfiles WRKY domain profile. 182 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 ProSiteProfiles WRKY domain profile. 11 69 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2943 295 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 252 IPR044810 GO:0003700
Bisa05g2943 295 SUPERFAMILY WRKY DNA-binding domain 180 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2943 Bisa-ChrBisa05 70854622 70858009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2943 7 258 WRKY Transcription Factor Family AT2G38470 34.717 1.80e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa05g2943 WRKY 1.9e-18 CL0274