Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2931 ATGAGTGGGAGTGAGAAGCATAAGAGTTACTATAAATGTACAATCCCAAATTGCCCCGTGAAGAAGAGAATTGAGAAAACTATAGATGGACATATTAGTAAGGTACTTTATAAGGGCACTCGTAACCATGGCAAGCCTCAACTTACAATGATGAGAAACTTATCATTTGAAACTCTTTATCCCAGTGACGAAACCCCATATCAGTCATTGGACTCTGAAGGGTATGATCGGTTGGATTCGGATGACACAGCAAACAACTCATCAATATCAATATTGGATGCTCAATTTGGAGTGGAGGATACTGTTTTTCGATGCTATTTGGATTCACAACTTGAAATTGGAAATGGAGGCGCCGATGATGAAGAAGATAGCGTCAAAATTGAGATTGATGATGTAAATGGAGTAGAGCCAGAAACTGCAGCTCGGAGTGAAGGCGTCAACGAAGAGGTCCCTAAACTAGAGATTGGAAATGGAGTCCATGTTGATGAAGAAGACAGTACTGACTCTGTAATTCATACTGCAGCAACTCATAACGAAATTTCTTCTCCTTGTGCGGCTTGCAAGTTCTTACGACGTCGTTGCGCCGAGGGATGCGTCTTTGCTCCTTATTTTCCTCGAGATGATCCTGACAAGTTTGCCATTGTCCACAAGGAGCTTCCGGTGCATCAAAGAGGAGACGCAGTGAGCAGTTTGGTGTATGAGGCGAATGCGAGAGTGAGGGATCCAGTGTATGGCTGCGTAGGGGCTATTTCGTACCTCCAAAGCCAGGTGTCCCAATTGCAGATGCAGCTCGCAATGGCTCAGAAGGAGATCCTGTGCATCCAGATGCAGCAAGAGCCTACCAACGCACCAATCCCGACCGATCATTACCAAGAAGACAGCAAATCGATGAATATCCTATCTGATAATAACTACGATATCAGCAGTGTTAATCCTTTTCATTATCAGTATCTCAGCTTTGCTTCTTCTTCTTCTTCTTCGTCGTCTAACAATGTACTTCAAGACACTCTTAAGAGAGAGTCCTTTTGGACTTGA 1035 0.4367 MSGSEKHKSYYKCTIPNCPVKKRIEKTIDGHISKVLYKGTRNHGKPQLTMMRNLSFETLYPSDETPYQSLDSEGYDRLDSDDTANNSSISILDAQFGVEDTVFRCYLDSQLEIGNGGADDEEDSVKIEIDDVNGVEPETAARSEGVNEEVPKLEIGNGVHVDEEDSTDSVIHTAATHNEISSPCAACKFLRRRCAEGCVFAPYFPRDDPDKFAIVHKELPVHQRGDAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLAMAQKEILCIQMQQEPTNAPIPTDHYQEDSKSMNILSDNNYDISSVNPFHYQYLSFASSSSSSSSNNVLQDTLKRESFWT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2931 344 Coils Coil 250 270 - -
Bisa05g2931 344 SUPERFAMILY WRKY DNA-binding domain 3 46 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2931 344 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 181 296 - -
Bisa05g2931 344 SMART WRKY_cls 1 45 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2931 344 Pfam WRKY DNA -binding domain 2 43 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2931 344 Gene3D WRKY domain 1 47 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2931 344 ProSiteProfiles WRKY domain profile. 1 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2931 344 Pfam Lateral organ boundaries (LOB) domain 183 268 IPR004883 -
Bisa05g2931 344 ProSiteProfiles LOB domain profile. 182 271 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2931 Bisa-ChrBisa05 70506402 70516598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2931 181 344 AS2 family AT2G30130 56.771 1.11e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g2931 LOB 1.1e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g2931 05 70506402 70516598 Bisa05g2931 05 70506402 70516598 ECH