Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2930 ATGGGGGGTTCTTCTCCTTGTGCCTCCTGCAAGCTGTTACGACGTCGTTGCACCAATGAATGCATCTTCGCTCCTTATTTCCCTCCTGATGATCCTCACAAGTTCGCCACTGTCCACAAGGTCTTCGGTGCCAGCAATGTCGCCAAAATGTTGCAGGAGCTTCCGGTGCATCAAAGAGGAGACGCAGTGAGCAGTTTGGTGTATGAGGCGAATGCAAGAGTGAGGGATCCAGTGTATGGCTGCGTAGGGGCTATTTCGTACCTCCAAAGCCAGGTGTCCCAATTGCAGATGCAGCTCGCAATGGCTCAGAAGGAGATCCTGTGCATCCAGATGCAGCAAGAGCCTACCAACGCACCAATCCCGACCGATTATTACCAAGAAGACAACAAATCGATGAATATCCTATCTGATAATAACTACGATATCAGCAGTGTTAATCCTTTTCATTATCAGTATCTCAGCTTTGCTTCTTCTTCTTCTTCTTCGTCGTCTAACAATGTACTGAATGGGGACTATGAGGATCGAAGAGCAAGTTGGGGAGACCCATTGGAGATTTTGGACCAAATCGTGTAG 573 0.4817 MGGSSPCASCKLLRRRCTNECIFAPYFPPDDPHKFATVHKVFGASNVAKMLQELPVHQRGDAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLAMAQKEILCIQMQQEPTNAPIPTDYYQEDNKSMNILSDNNYDISSVNPFHYQYLSFASSSSSSSSNNVLNGDYEDRRASWGDPLEILDQIV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2930 190 Coils Coil 85 105 - -
Bisa05g2930 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 133 - -
Bisa05g2930 190 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Bisa05g2930 190 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2930 Bisa-ChrBisa05 70483942 70487177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2930 3 116 AS2 family AT2G30130 89.474 3.94e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g2930 LOB 1.2e-42 No_clan