Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2923 ATGAAGGAGTTCTTACCAAGACAAGTGCGAAGGTCGACTGTCCTGATCGAGTACGTCCAGGTGACAGGGATGGACAATGGGGACGAGGAGGGCGCATATCAGGCGACAGTGAAGGTTGCAGGCCATGTGTTCAAAGCGCTTCTGTATGATCAAGGCGTTGAGGATGGAGATAGTTATCCTAATTTAACACAGCTTCCTTTGGGAGATGGCAGTGCTGGAGGACACGACGAAACTGGCGTCGGTGGCGGTGGCGGTGGCAGGGCCAGGAGAGACGGAGCCGCTTCTTCATCCCCAATGCTGGATCCTTCTGATGTTTCTGCTGCACCTTCAGGTACAAAGTTCCTTGCAAGTTTAACTTATGGAAACAACAAACAAGATAATGTTACTTTAGAACACAATGTGGCTAATGGGACCAAGTCAGATTCACAACACCCGCAATTGAGAAAAAGCTCTCAAGTTTTCGAGCTCTTGCGAAGACGGAACCCTTGGTCGTCTGCATCTCGTCGTTTCAGAATCTCCTTCAGTCATTCTTCGGCTTTAGTATTTTCTCCATTGAAGGTCAGCATTCTCCTTACTTTTGTCTTGATTTGCTGTTCTTCACTTCCAGATCTGGCTGTTCTCTTGTTTGCTTCCCTGATCCTAGCTTGA 648 0.4815 MKEFLPRQVRRSTVLIEYVQVTGMDNGDEEGAYQATVKVAGHVFKALLYDQGVEDGDSYPNLTQLPLGDGSAGGHDETGVGGGGGGRARRDGAASSSPMLDPSDVSAAPSGTKFLASLTYGNNKQDNVTLEHNVANGTKSDSQHPQLRKSSQVFELLRRRNPWSSASRRFRISFSHSSALVFSPLKVSILLTFVLICCSSLPDLAVLLFASLILA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2923 215 MobiDBLite consensus disorder prediction 59 106 - -
Bisa05g2923 215 NCBIfam LRP1 C-terminal domain 5 53 IPR006511 -
Bisa05g2923 215 Pfam Domain of unknown function (DUF702) 4 54 - -
Bisa05g2923 215 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 109 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2923 Bisa-ChrBisa05 70394733 70401627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2923 2 105 C2H2 Transcription Factor Family AT5G12330 42.308 1.25e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa05g2923 DUF702 2.1e-12 No_clan