LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa05g2922	ATGGACGATGGTGACGAGGAGGGCGCATATCAGGCGATTGTGAAGATTGCAGGTCATGTGTTCAAAGGGTTTCTGTATGATCAAGGCGTTGAGGATGGAGTTAGTTATCCTAATTTCACGGAGCTGCCTTTGGGAGATAGCAGCGCCGGAGGATACGATGAAACTGGCGGCGTCGGCACGGCCAGAAGAGACGAAGCCACTTCTTCTTCCCCAGTGCTGGATCCTTCTGATGTTTCTACTGCCCCTTCAGGAGACCACGAACAAGATAACATTACTTTAGAAAACAATGTGACTACCAAGAGTGAGTCAGATTTACAACACGTGCAATTGAGAAAAAGAGGACCGAAATTCAATCTAAAGAAGATGGAAACAGCTGTGGTCGAAGGACTAGAAGCAGCTCTGGTCGAAAGACCGAAAGTCCATATAAAGAAGATGGAAGAAGCTCTGGGCCATGTGTTCAAAGGGTTTCTGTATGATCAAGTCGTTGAGGATAGAGGTAGTTATCCTAATTTAATGGAGCTGCCTTTGGGCAATTGCAGCGCTGGAGGACATGACGAAACTGGTGGCAATGGAGCGCGTGGATTTGCTGCTTGTCAAGCAGCAAATCCAGACTCGGCGATAGAGGGGTCAGGAGAGATGGACCCGCTTTTTCTTCCCCAATGTTGGATCCTTCTTATGTTTCTATTGCCCTTTCAAGTACATACAGAGTTCCTTGGAAGTTTAACTTATGGTAATCCCATTAATTGA	747	0.4659	MDDGDEEGAYQAIVKIAGHVFKGFLYDQGVEDGVSYPNFTELPLGDSSAGGYDETGGVGTARRDEATSSSPVLDPSDVSTAPSGDHEQDNITLENNVTTKSESDLQHVQLRKRGPKFNLKKMETAVVEGLEAALVERPKVHIKKMEEALGHVFKGFLYDQVVEDRGSYPNLMELPLGNCSAGGHDETGGNGARGFAACQAANPDSAIEGSGEMDPLFLPQCWILLMFLLPFQVHTEFLGSLTYGNPIN	248

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa05g2922	248	PANTHER	PROTEIN LATERAL ROOT PRIMORDIUM 1	1	82	IPR007818	GO:0003700\|GO:0006355
	Bisa05g2922	248	NCBIfam	LRP1 C-terminal domain	2	30	IPR006511	-
	Bisa05g2922	248	Pfam	Domain of unknown function (DUF702)	1	31	-	-
	Bisa05g2922	248	MobiDBLite	consensus disorder prediction	62	90	-	-
	Bisa05g2922	248	MobiDBLite	consensus disorder prediction	41	90	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa05g2922	Bisa-ChrBisa05	70356265	70362133	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa05g2922	1	78	C2H2 Transcription Factor Family	AT5G12330	47.436	1.83e-14	70.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	SRS	Bisa05g2922		DUF702	3.9e-10	No_clan