Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2921 ATGAGCTCCCTTTCGTCTGATAGTGGCAGATCGTCATCATTTGCCAGCAAGCCGTTAGCGAGACTTCGAAAGAATAAGGGAGCTCCCAGTGCAAGGGAGGCAAGGTTCAAGCAAGTCTCTCGGCCAATGATGCTTGTGGGAGATTCAGTAACACATTTTCTCACTCCGAGAGGCTCGCAAGCAGATGGAATTGGACCAGAATGGGCTGCCCCCACTCCCAACCAAGATCTTTCCTTCCCACCGGTCTCAGGCCTAGGCCAAAGGATTCGATCGGAACAACCATACCACAAGGAAGATTGCCAACAAGAAAATGAAGCCCCTGGTATTGAAGATAGTCTTGCAGTCAGAATTGAGTCTGCAAATGGAGAGATTCAGCCATCCCCAAGTATTGAAGAGTTTTCAGAGGAAAGCATATCCAGGGACAGTCAACAAAATAATGAAAACTACACACTCGGATCGTCTATTAGGATTGATAACCCGGAGTCTTTACCAGGACAAGTGCGAGCTCCGGCTGTCTTCAAGTGCATCCGGGTGAGGGGGGTGGACGATGGGGAGGACGAGTACGCATATCAGACGGTTGTGAAGGTTGCAGGCCATGTGTTCAAAGGGTTTCTGTATGATCAAGACGTTGACTCAACGGAGCTGCATTTGGGCGATGGTAGCGCAGGGGGACACGAGGCAACTGGCGGCCGAGGAGATGGGGAAAGTGGCAGTGATGGCGGTGGCGGGGCTAGGAGACACGGAGCCACTTCTTCATCCCCAATGCTGGATCCTTCTGATGTTTCTGCCGCCCCTTCAGGAAACCACGAACAAGATAACGTTACTTTAGAAAATAATATGGCAGCAGTCAAAAGTGACTGGACGCAGAGTTTTTCTACAGGGACTGAGTTAGATTCACAACACCTGCAATTGAGAAGAAGGAGGAGGACAAAAAGTCAAACTAAAGAAGATAGAAGGAGCTCTGATCAGGTTGAAGAGAAACGTCCTCCACCACCTTCAGAAGACAACCACATGGATAGGACGGAAAGTCAATATGAAGAAGATGCAAGCAACTCTAACCGGGTTGAAGAGAAACATCCTTTGCTATCTTCAGAAGACATCCACATTGCAGAGCGTATGCAGTACAATAGTTTTTCATTGGTGTTGGCCATCCACAACCTTATCGGCCCCAAAAGTTTAGCCACGTGA 1188 0.4891 MSSLSSDSGRSSSFASKPLARLRKNKGAPSAREARFKQVSRPMMLVGDSVTHFLTPRGSQADGIGPEWAAPTPNQDLSFPPVSGLGQRIRSEQPYHKEDCQQENEAPGIEDSLAVRIESANGEIQPSPSIEEFSEESISRDSQQNNENYTLGSSIRIDNPESLPGQVRAPAVFKCIRVRGVDDGEDEYAYQTVVKVAGHVFKGFLYDQDVDSTELHLGDGSAGGHEATGGRGDGESGSDGGGGARRHGATSSSPMLDPSDVSAAPSGNHEQDNVTLENNMAAVKSDWTQSFSTGTELDSQHLQLRRRRRTKSQTKEDRRSSDQVEEKRPPPPSEDNHMDRTESQYEEDASNSNRVEEKHPLLSSEDIHIAERMQYNSFSLVLAIHNLIGPKSLAT 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2921 395 MobiDBLite consensus disorder prediction 1 15 - -
Bisa05g2921 395 MobiDBLite consensus disorder prediction 54 163 - -
Bisa05g2921 395 MobiDBLite consensus disorder prediction 252 272 - -
Bisa05g2921 395 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 146 265 IPR007818 GO:0003700|GO:0006355
Bisa05g2921 395 MobiDBLite consensus disorder prediction 314 359 - -
Bisa05g2921 395 MobiDBLite consensus disorder prediction 292 359 - -
Bisa05g2921 395 MobiDBLite consensus disorder prediction 122 160 - -
Bisa05g2921 395 NCBIfam LRP1 C-terminal domain 163 208 IPR006511 -
Bisa05g2921 395 MobiDBLite consensus disorder prediction 1 39 - -
Bisa05g2921 395 MobiDBLite consensus disorder prediction 216 272 - -
Bisa05g2921 395 Pfam Domain of unknown function (DUF702) 145 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2921 Bisa-ChrBisa05 70335643 70346075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2921 161 261 C2H2 Transcription Factor Family AT5G12330 49.074 1.46e-23 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa05g2921 DUF702 9.8e-22 No_clan