Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2890 ATGTCGTGCTCCGTTGCGCTTTCCAACTCTCCGGTGTTCTCTCCGTCGTCTTCACTCTTCTGCAACAAGCCCCCTGAGTCTGTTTCGCTCTCGCTGTCTCACCTGAAGCTGCCTACCTCCGCCGCGTCGGCTTGTTCTTCTCCGTCCTCGCCGTCCTCACCGTTTCGACTTCGATTCGGCAAGGCCCCTCCTACCGGGCTTTCCAATTCGGACTCGGAGGCTTCGACTTCGTCCGCCTCGATGAACGGAGCTGTTTTGAAGAGGAAGAGACCCGCCAGGCTTGATATTCCTGTCTCGTCTCTGAACCTTGGGGTTCCGGCGACGCCGTCGTCTGCTGTGGCCAGAGATGGCGTAGAGGTCGAGGGGATTGAGTTTTCTGTGGTTTGTAAGAGAGGGAGGAGAGAGTTCATGGAGGATCGTTATTCTGCTTCTGTCAATCTTCAAGGAGACTCCAAACAGGCGTTCTTTGGGATATTTGATGGGCATGGAGGTGCAAAAGCTGCTGAATTTGCAGCACAGAACTTGGAAAAGAATGTTCTTGATGAAGTGATCAGAAGAGAAGATGATGAGATGGAGGAGGCAGTGAAGCATGGCTACTTGAAAACAGATTCTGATTTCTTGAAAGAGGATCTCCATGGCGGCTCCTGCTGTGTGACAGCACTGATCAAGAATGGCAGCCTTGTGGTGTCCAACGCTGGTGATTGTCGTGCTGTCATTAGCTGGGGTGGCGTGGCTGAAGCCCTAACATCCGATCACCGGCCTTCAAGGGAAGACGAAAGGGACCGAATTGAGACCTTGGGTGGGTATGTTGACGAATGCCGTGGAGTTTGGAGAATCCAGGGATCTCTGGCAGTTTCCAGAGGCATTGGAGATGCACATTTGAAGCAGTGGGTGATTGCTGAACCTGACACTAAACTTCTCACAATTCAACCTCAGCATGACTTGTTGATTCTTGCTTCTGATGGATTATGGGACAAGGTTAGTAATCAAGAAGCTGTGGATATCGCTCGTCCTCTTTGCGTTGGGGTTGACACACCAGAGCCATTGATGGCCTGCAGAAAGCTCGTGGATTTGTCTGTTGCACGAGGCTCTCTTGATGACATTAGTGTTATGCTGGTCAAATTGGAGCACTTTCATAATTAG 1143 0.5118 MSCSVALSNSPVFSPSSSLFCNKPPESVSLSLSHLKLPTSAASACSSPSSPSSPFRLRFGKAPPTGLSNSDSEASTSSASMNGAVLKRKRPARLDIPVSSLNLGVPATPSSAVARDGVEVEGIEFSVVCKRGRREFMEDRYSASVNLQGDSKQAFFGIFDGHGGAKAAEFAAQNLEKNVLDEVIRREDDEMEEAVKHGYLKTDSDFLKEDLHGGSCCVTALIKNGSLVVSNAGDCRAVISWGGVAEALTSDHRPSREDERDRIETLGGYVDECRGVWRIQGSLAVSRGIGDAHLKQWVIAEPDTKLLTIQPQHDLLILASDGLWDKVSNQEAVDIARPLCVGVDTPEPLMACRKLVDLSVARGSLDDISVMLVKLEHFHN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2890 380 PANTHER PROTEIN PHOSPHATASE 2C 82 374 IPR015655 GO:0004722|GO:0006470
Bisa05g2890 380 SMART PP2C_4 110 373 IPR001932 -
Bisa05g2890 380 Pfam Protein phosphatase 2C 124 367 IPR001932 -
Bisa05g2890 380 ProSiteProfiles PPM-type phosphatase domain profile. 124 375 IPR001932 -
Bisa05g2890 380 MobiDBLite consensus disorder prediction 65 83 - -
Bisa05g2890 380 Gene3D - 116 380 IPR036457 -
Bisa05g2890 380 SUPERFAMILY PP2C-like 121 377 IPR036457 -
Bisa05g2890 380 CDD PP2Cc 125 375 IPR001932 -
Bisa05g2890 380 SMART PP2C_SIG_2 132 375 IPR001932 -
Bisa05g2890 380 MobiDBLite consensus disorder prediction 41 84 - -
Bisa05g2890 380 FunFam probable protein phosphatase 2C 25 117 378 - -
Bisa05g2890 380 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2890 Bisa-ChrBisa05 69340026 69341942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2890 1 378 PP2C-type Phosphatase Gene Family AT2G30020 64.899 5.66e-167 471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0330 09 4732287 4733944 Bisa05g2890 05 69340026 69341942 CCT
Bisa05g2890 05 69340026 69341942 Bisa05g2890 05 69340026 69341942 ECH
Bisa09g0330 09 4732287 4733944 Bisa05g2890 05 69340026 69341942 ECH