Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2841 ATGGAGATCCTTCAATCTCCACCCCATATTTCCAACCCTAACTGGCTTGTTGACCAGGCCATGCCCTCAAAGTGGACTCAGTATGAGAACAAGCTCTTTGAGAATGCCCTGGCGGTGTACGACACAGACACGCCGGACCGGTGGGCGAAAGTGGCGGCGATGATACCGGGTAAAACGGTGTGGGATGTGATGAATCAGTACAGAGAGTTGGAGGAAGATGTTTGCAGTATTGAAGCTGGGTTGATCCCAATTCCTGGCTATGTCACTCCAAAACCCTCACAATTCTCATTTGATTGGGACAACACTTATGGGTTTGATTATGGGTTTAAGGCATACACTGCCAGGAGAAGAACTCCCGAGCAAGAAAGGAAGAAAGGTGTTCCTTGGACTGAAGATGAACATAAGCTATTTTTGCTAGGCCTAAAGAAGTATGGCAAAGGCGACTGGAGAAACATATCGCGAAATTTCGTCGTTAGCCGGACGCCGACTCAGGTGGCGAGCCATGCTCAAAAGTTCTTTATGAGGCAACTCTCAGGAGCCAAATACAAGAGGAGAGCAAGCATCCATGACATAACAACAGTGAACCTCTCAGAAACAGCAACAACACCTTCTCCTTCTTCTCCTTCTTCAGAAATCAACAATAATAGGTCTAACTCAAATTCCACTGTTACTACAAATCAAGCACATTTTCAATGGAATCAACCAAATGCAGGAGAGGCCATGGGATTCAATCCTTATTATGGGGTTAAACTGCAAGGTCAAAATCTGCAAACAAGTGCTCTTCATGAGGCTTCTTACTTAGCACATCAAACTCACAACTTCAACTTTCAAACTCAACATCTTCCCCATGCTTGA 855 0.4526 MEILQSPPHISNPNWLVDQAMPSKWTQYENKLFENALAVYDTDTPDRWAKVAAMIPGKTVWDVMNQYRELEEDVCSIEAGLIPIPGYVTPKPSQFSFDWDNTYGFDYGFKAYTARRRTPEQERKKGVPWTEDEHKLFLLGLKKYGKGDWRNISRNFVVSRTPTQVASHAQKFFMRQLSGAKYKRRASIHDITTVNLSETATTPSPSSPSSEINNNRSNSNSTVTTNQAHFQWNQPNAGEAMGFNPYYGVKLQGQNLQTSALHEASYLAHQTHNFNFQTQHLPHA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2841 284 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 21 243 IPR043363 -
Bisa05g2841 284 MobiDBLite consensus disorder prediction 197 225 - -
Bisa05g2841 284 NCBIfam myb-like DNA-binding domain, SHAQKYF class 124 176 IPR006447 GO:0003677
Bisa05g2841 284 SUPERFAMILY Homeodomain-like 122 176 IPR009057 -
Bisa05g2841 284 Gene3D - 19 84 - -
Bisa05g2841 284 FunFam transcription factor MYB1R1 127 178 - -
Bisa05g2841 284 Gene3D - 127 177 - -
Bisa05g2841 284 SUPERFAMILY Homeodomain-like 23 78 IPR009057 -
Bisa05g2841 284 CDD SANT 24 70 IPR001005 -
Bisa05g2841 284 FunFam Transcription factor SRM1 18 84 - -
Bisa05g2841 284 Pfam Myb-like DNA-binding domain 128 171 IPR001005 -
Bisa05g2841 284 Pfam Myb-like DNA-binding domain 23 69 IPR001005 -
Bisa05g2841 284 CDD SANT 128 173 IPR001005 -
Bisa05g2841 284 ProSiteProfiles SANT domain profile. 129 177 IPR017884 -
Bisa05g2841 284 ProSiteProfiles Myb-like domain profile. 121 173 IPR001005 -
Bisa05g2841 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 121 177 IPR017930 -
Bisa05g2841 284 SMART sant 21 73 IPR001005 -
Bisa05g2841 284 SMART sant 125 175 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2841 Bisa-ChrBisa05 68455204 68456697 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g2841 Myb_DNA-binding 7.2e-11 CL0123