Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2790 ATGAGCGGCGACGGCACAAGGCTCGTCTGCGTCACTGGTGCATCCGGCTATATTGCTTCCTGGCTCGTCAAGCTCCTTCTTCTTCGCGGTTACACCGTCAAGGGGACTGTACGTGACCCAAATGATTCAAGAAAGGTGGACCACTTGCTTAAACTTGATGGTGCAAAGGAGAGATTGCATTTGATTAAAGCAAATCTCCTGGAAGAAGGTTCCTTTGACCCTGCTATTGAGGGGTGTGAAGGTGTCTTTCATACTGCATCTCCCGTGTCTTTTAACGTCAAAGACCCACAGATTGAACTTATTGACCCAGCAGTCAAGGGAACTCTTAATATTCTTAAATCATGTGCAAAGTCATCATCTGTAAAACGAGTTGTTTTAACATCTTCCACAGCTGCAGTTGTATATAATGGAAAGCCTAGAACTCCTGAAGTTGTAGTTGATGAGACATGGTTTTCAAAGCCAGATTTGTTTAGTGGATCTGCGCTCTGGTCTGACTATGTTCTTTCCAAGACTCTAGCTGAAGATGCTGCCTGGAAATTTGTAAAAGAAAACAACATTGACATGGTTGTTATCAATCCAGCAATGGTGATAGGACCTCTCTTGCAGCCATCGCTTAACACAAGTGCTGCTGAAATTTTAAATCTAATAAATGGGGAACAAACATTTCCAAATTTTAGTTTAGGATGGATCCATGTGAAAGATGTTGCAAATGCCCATATACGGGCATTTGAAATATCTTCAGCAAGCGAAAGATATTGTTTGGTTGAGTCAGTGGCGCACTACATAGACATTGTGAAGATTTTACGTGAGCTGTATCCAACATTACAACTTCCCGAAAAGTGTGCAAACAACAAGCCTTTAATGCCAAGATATCAGTATTCGAAAGAAAAGGCGAAAACTCTGGGAATTGAGTTTATTCCATTGGACGTCAAAATTCAAGCAACACTGAAGCGAATCAAGCACACCAACATCACGAGGCTCTCTTGCATCTGCGTTCACAAAGGGAACACCTATCTCGTCTACGAGTTCGCTGAAAATGGCTCACTCGACGACAGGCTTCACACTGAAAATAACAAGAAGTATCAGAATTCATTGAATTGGAAACAGAGGGTTCAGATTGCTGATGATATAGCCAACGCACTGAATTACCTTCACAACTACACGAACCCTCCTCATATCCACAAGAATCTCAAGAGTGGGAATGTGCTTCAGGATTCGAATTTCAGAGCCAACGTGTCGAACTTCGGATTAGCGAGAGTACTCGATGATGAAGACTTTGGGAGAGAGGGGGAATTTATGGAGGGCCATGGGTTAAAGGACGATGTGAGGGAGGTGCTTGAAGGCGTCGAACTTCGGATTAGCGAGGTGCTTAAAGGAGATATTGCAAAAAGCTGCGTAGAACGAGATATGAATTTGAGACCGGCCATTTCTGATGTGTTCATGACAGTCAAAGATTCAATCGTCGATGCTGGATGGGATCCTTCTGATGAGGTTTATGGCTGA 1503 0.4325 MSGDGTRLVCVTGASGYIASWLVKLLLLRGYTVKGTVRDPNDSRKVDHLLKLDGAKERLHLIKANLLEEGSFDPAIEGCEGVFHTASPVSFNVKDPQIELIDPAVKGTLNILKSCAKSSSVKRVVLTSSTAAVVYNGKPRTPEVVVDETWFSKPDLFSGSALWSDYVLSKTLAEDAAWKFVKENNIDMVVINPAMVIGPLLQPSLNTSAAEILNLINGEQTFPNFSLGWIHVKDVANAHIRAFEISSASERYCLVESVAHYIDIVKILRELYPTLQLPEKCANNKPLMPRYQYSKEKAKTLGIEFIPLDVKIQATLKRIKHTNITRLSCICVHKGNTYLVYEFAENGSLDDRLHTENNKKYQNSLNWKQRVQIADDIANALNYLHNYTNPPHIHKNLKSGNVLQDSNFRANVSNFGLARVLDDEDFGREGEFMEGHGLKDDVREVLEGVELRISEVLKGDIAKSCVERDMNLRPAISDVFMTVKDSIVDAGWDPSDEVYG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2790 500 Pfam Protein tyrosine and serine/threonine kinase 314 424 IPR001245 GO:0004672|GO:0006468
Bisa05g2790 500 CDD FR_SDR_e 9 302 - -
Bisa05g2790 500 Pfam NAD dependent epimerase/dehydratase family 9 245 IPR001509 -
Bisa05g2790 500 ProSiteProfiles Protein kinase domain profile. 261 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2790 500 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 317 IPR036291 -
Bisa05g2790 500 Gene3D - 7 323 - -
Bisa05g2790 500 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 309 - -
Bisa05g2790 500 FunFam Dihydroflavonol reductase 6 327 - -
Bisa05g2790 500 Gene3D Transferase(Phosphotransferase) domain 1 324 443 - -
Bisa05g2790 500 SUPERFAMILY Protein kinase-like (PK-like) 315 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2790 Bisa-ChrBisa05 67090121 67099226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2790 2 327 Miscellaneous Gene Families AT5G19440 68.405 1.39e-164 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa05g2790 Epimerase 3.3e-21 CL0063