Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2761 ATGGAGTTCGTGGGCAAAACCGTTAAGAAAGAGGTCGAGGGGGTTGGTATTATCTCGGGAACAGTGAAATCTTATGATTCCTCATCTGGGTTCGTCGAGATCGTCTATGAAGATGGTAATTCCAAAGAGTTGGAATCATCTGACGTAGCTTCTCTTCTGCAAGGTGAGCCGGAGCTCGAAAAGGTGAAGCGCCGGGTCGGAAGGAAACCCAAGAAGCGGCGTCGTGTTGAAAGAAAGCAAGAAACCAGTGGAAGCTCAGGTAATACTAGTGAGAATTTGGTGAGTCCCATGCCCAATGATACTGAATTTAGGGGGGTTTTGGATGAAAGTGTTTCTGTTACTGGGAATTTGAAAGTAAACGGTGAGTTAGATAGTGGGTTGAAGAGAAGCCCGGGTGTGGGCAATGGGCCGGGAGATAATTTGAATTTTGGCACGGAAATTATGGGCAATGCGAATTGGAGTGCTAGCTCTAATGGGAGCAGAGAAAATCAAGGGAAGGAATGTGGGTATGAAGAGAAATCGAAAGAAAGTATATCTACTAATGGGAATTCCAACACAACGGATTTTGTAAAAGATGGGTTTGATTTGAATGCTGGGCTTAACCTGAACGAGGATTTGGATCTGAATGATGGGTGTAGTTCACTTGTTTATGCTGAGGATGGTTTGAAGAAAAGGGGTTGTATTGATTTAAATTTGGATGTAAATAATGAAATTGATGTCAGCCTGGACGCGATTGATTTAGGTTGTTCAGCTGTGAAAACATCAAAGCGGGAGTGTACATTTGATTTGAATGTGGAGGTATGTGATGAATTTAAGGAAACTGACGGTGGTGCTGATGGGGATGGACTGTCAGAGGGAGGTGGTTTAGTTGGTAAGATGGAGCGAAGCCCCGAGTCAGAGACAGATATTAATCAAAATTCTGTAGAAGATGATCGTGTTAAAAGGAATTTGGATGATGTCGCAAATTCTATCAAATTGGAGGTAATTAATAGTTCCCTTGAGCATGCAAGTAAAGACGCATCTTTAAGTTTGATTGAGGAAAAGCAAGATGGAGTTTACAATGGAGGTATTGCGGCTATTGATACTCTTGGGGTTTCAAATGCTAATTCTCTTAACCATTGTGATTCTGCGGAGGTTAGGCAAGAGCATAGTCCTTCTGAACCTGGTTTTGCTGTAATGAATGAATGCCAAGATGAACCAGGAAGTCAGTGTAAACAAGGAAGTAGACGAAGGAAGAGAAGAAAACTATCAGATTATCTGAAATCCCCCTCAGAGACAGTTTTAAGGAGGAGTTCTCGCCGGGCATCAGCTACAAAACATGATTCAAACACCATAACATTGAATGTGATGGATGATCCATTGATGTCTCCAGGGCCCAGTGCATTAACAGAAGAAAAAACTATGATTTCTGGTTCTGGGCAATGCGAACAATGCAATGTTCTTCCACCAAAGCTGCAATTGCCTCCTTCTTCTCAAAATTTAAACCTAGATGATATTCCTGTTCTTGATCTTTTTTCCATTTATGCCTGTTTGAGGTCATTCAGTACTATATTATTTTTAAGTCCTTTTGAGTTGGAGGATTTTGTTGCTGCACTGAAGAGTGTAAATCCTAATATATTGTTTGACAACATTCATGTTTCTATTTTGCAAATTCTTAGAAAGCACTTGGAATACCTCTCCAATGAGGGTTGCCAATCTGCTTCTAATTGCCTGAGAAATTTGAACTGGGATTTGTTGGACCTGGTCACATGGCCTATTTTTATGGCTGAGTACCTTCTGATTCATGGTTCAGGACCAAAAACTGGTTTTGATCCTAAGCACTTGATGTTCGGAATTGACTACCACAAGCAGCCCGTAAGTGTGAAAGTTGATATTCTTCAGTGCCTTTGTGATGATATGATTGAAGTGGAAGCGATAAGATTGGAGCTTAACAGAAGATCGTTGGTAGCTGAGACTGATATGAGCTTCGATCAGAGTATGTATTTTGACATTTACAAGAAAAGGAGAACTCTAATGGATGTGTCTGGTGGCTCTTGTCTGACTGAGGATGTTGTTGATGACACAACTGACTGGAACAGTGATGAATGCTGCCTTTGCAAGATGGATGGAAGTTTAATATGCTGTGATGGCTGCCCTGCTGCATTCCACTCAAGGTGTGTTGGAATTGCAAGTGACCATTTACCTGAAGGTGATTGGTATTGCCCTGAGTGTGCAATTGGCAGACATAAACCCTGGATGAAAACACAAAAGTCACTTCGAGGAGCAGACCTTTTAGGAATTGATCCTTGTGGTCGTCTTTATTTTAACTCCTGTGGTTACCTGTTAGTGTCAGATTCGTGTGACATGGGATCCTTGTTCAATTACTACCACAGAGATGATCTAAATGTTGTAATTGAAGTGCTAAAATCGGCTGATGCTTTCTATGGTGGCATATTAATGGCTATCTGCAAGCACTGGGATATTCCTTTTAACTTAAATGGAGGAGCCAGTAAGTTGGAAATCTTAAATCAAAGTTCTGGCAATGACATGCATATTAAGGTTGAATACTCAGCTATATATCCATCCTTAGCACCTCTTACATCTTCAGAAACATTCTTGGACATGAATCATGCTGATAACCCAAGAAAGATTGAAGAAATTTCAACTGTCCAGCATCATGGCCAGGAGTTTCTCAAAGCAGGGAAACGGTTAAATTCAGTGACAACAATAGAAAGTCATTCAGTTGCTTCAGAAGGATCAGCTGATATTTCACAAATGAGATCAACCACTGATAATCTTCTCACACCACCACTTGATTCCAGTAGATCTGATGAGTCCTTGAATCAGTCAGGAATACCAGAAAAATCCCATCCAGTTGGTCACTGTTCCTTGACATCTTCCAGCTTAGATCTGAGTCATAAAATACACTTGAAATCTGCAGGGGCTAGCTATACCACTACTTTGTCCACTGGAAATAGAGCTACTTCAGCAGTGCCTTGTGGAATTGACTACATAAACTATTACAGCTTTGCTCGAACAGCTTCGTTAGTGGCAGAGGAGTTGACACGTAAATTGCCTGAAAAAATCAATAAGAACTCTGTAATGTCTGAAGAAGACTTTATTTCAGAACAAGCAAAGGCGATTTATAAGAAATCCACAAACTTTTACTGGCCAAGTTCTCAAAATGTTAATGCAGCTGCCCAAAAAGAAAAATGTGGGTGGTGCTTTTCTTGCAAAGCTGAAAATGATGACAGAGATTGCTTGTTTAACTCTGTGGTGATGCCTGGTCGTGAATTGTCTAAAAGCAATCTAGTTGGGCTTCAATCTAAGAACCAGAATGCCCATCTTAGAGATGTCATATGTCATATGCTCTCCATTGAGGATCGATTACGTGGGCTTCTATTAGGGCCATGGTTGAATCCCCATCATTCTAAGAATTGGCGTAAAGATCTTCTAAAGGCATCTGATGTCGCATCTATTAAATGCTTATTACTCACTTTGGAATCCAATTTGCGGCTTCTAGCACTTTCAGCAGATTGGTCAAAACATGTGGATTCTGTTGTTACCATGGGTTCGGCTTGTCATATTTCATCACGCACATCTTCAAGGCATTATATTGCAAGGAAAAGGAGTAGGTATTCAGATATTGAATCCAACTCATCTAACACAAGTGGTTTGGGAACATATTGGTGGAGAGGTGGTAGGCTTTCGCGTCATTTGTTTAATTGGAAAGTTTTGCCTCGCTCCTTGGTTACCAAGGCTGCTAGAAAAGCTGGGTGTAGTAAGATACCTGGCATACTATATCCTGAGAATTCAGATTTTGCAAGGAGAAGCAAATACATTACTTGGCGAGCTGCTGTTGAGACATCAATTAGTATTGAACAGCTTGCCATCCAGGTTAGAGAACTTGATTCGAACATTAGGTGGCACGATATTGAGAATACACATCCTCTGTATGTGCTGGACAAGGAATCTAGAAAATCAATCAGGCTGTTCAAAAAAGTAATTGTACGCAGGAAGAGCACTGAAAGGGAATCTGTGAAGTATCTTCTTGATTTTGGGAAGAGAAGGGCTGTTCCAGATGTTGTTACGAAACATGGCTCTCTGTTGGAACAACCCTCAAGTGACAGGAAAAAATATTGGCTTGGTGAACCTTATGTTCCTTTGCATCTTATAAAGAATTTTGAGGACAAGAGAATTGCTCGCAAGTCCAATGAGATGAAACCAGGAAAAGTTCTGGAAAATTGTGGATTAAATAAGAGAGTTCCTAAGAAACAGGGATTTTCTTATTTGTTTTCTAGGTTGGAACGATCTGACTACTATCAATGTGGCCACTGCAACAAAGATATTCCAATAAGGGAAGCTGTGAGCTGCCTGTACTGTAAGGGATTCTTCCACAAGAGGCATGCCAGGAAATCTGGTGGGACCACAAAATGCACATATACATGTCACAGATGCCAGGAGGGGATGCATGTAAAGGCTAATTCTAAAAGAAGGAAAGTTGAGCCAAAACAAGGGAAGACTCAATCCCAGAAGTGTCTAAAGGCCCCCTCAGTGGGTAGACCAGTTAACCATAAAGGCAATAAGAAGTCATCGAAAAAGGGGCGGCAGTCAAAATCACAAGCCAATAAAAAGTTACCAAGTATACCTCTTCGCCGTTCAGCTAGGAAGGCCAAATGCTTGTCCCTTCAGAATAAAAGGAAAGGAGGACGTAAAAAAGGAAAGAAAATTAAATCCAGGAAGGTGACGTCTCGGAAGCCTAAGGAAACTACTACTCAATCTAAGGAGCTGGCAGTGACTTCTGAGCGGAAGAAAAGAACTCATGTCTCTCATAGTTATTGGCTTAACGGTCTTTGGTTGTCTAGAAAGCCAAATGATGAACGAGTAATGTTGTTTAGGGAGAAAAAGCATCTTGCCCCCTGTGAAGGTTTTTCCGGCACCATTGATGAACCTAAATGCCACCTTTGTTGTGGATATGGAAATACTTCAAATTATATTGCTTGTGAAATCTGTGGAGAGTGGTTTCATGGGGATGCTTTTGGACTCACTCTAGAGAATGTCAGACAACTTATTGGATTTAGGTGTCATGTTTGTCGCGATAGGGCTGCTCCAGTCTGTCCCCATGTGAATAGTAATGCCTTGGGTCATGCTGAAACCAATGCTGCCACTGAGTGTGCAGAGGAATTATCTAATCCTGTTTCACTGCAACCATTGAGTGAGGTTTGA 5205 0.4123 MEFVGKTVKKEVEGVGIISGTVKSYDSSSGFVEIVYEDGNSKELESSDVASLLQGEPELEKVKRRVGRKPKKRRRVERKQETSGSSGNTSENLVSPMPNDTEFRGVLDESVSVTGNLKVNGELDSGLKRSPGVGNGPGDNLNFGTEIMGNANWSASSNGSRENQGKECGYEEKSKESISTNGNSNTTDFVKDGFDLNAGLNLNEDLDLNDGCSSLVYAEDGLKKRGCIDLNLDVNNEIDVSLDAIDLGCSAVKTSKRECTFDLNVEVCDEFKETDGGADGDGLSEGGGLVGKMERSPESETDINQNSVEDDRVKRNLDDVANSIKLEVINSSLEHASKDASLSLIEEKQDGVYNGGIAAIDTLGVSNANSLNHCDSAEVRQEHSPSEPGFAVMNECQDEPGSQCKQGSRRRKRRKLSDYLKSPSETVLRRSSRRASATKHDSNTITLNVMDDPLMSPGPSALTEEKTMISGSGQCEQCNVLPPKLQLPPSSQNLNLDDIPVLDLFSIYACLRSFSTILFLSPFELEDFVAALKSVNPNILFDNIHVSILQILRKHLEYLSNEGCQSASNCLRNLNWDLLDLVTWPIFMAEYLLIHGSGPKTGFDPKHLMFGIDYHKQPVSVKVDILQCLCDDMIEVEAIRLELNRRSLVAETDMSFDQSMYFDIYKKRRTLMDVSGGSCLTEDVVDDTTDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGIASDHLPEGDWYCPECAIGRHKPWMKTQKSLRGADLLGIDPCGRLYFNSCGYLLVSDSCDMGSLFNYYHRDDLNVVIEVLKSADAFYGGILMAICKHWDIPFNLNGGASKLEILNQSSGNDMHIKVEYSAIYPSLAPLTSSETFLDMNHADNPRKIEEISTVQHHGQEFLKAGKRLNSVTTIESHSVASEGSADISQMRSTTDNLLTPPLDSSRSDESLNQSGIPEKSHPVGHCSLTSSSLDLSHKIHLKSAGASYTTTLSTGNRATSAVPCGIDYINYYSFARTASLVAEELTRKLPEKINKNSVMSEEDFISEQAKAIYKKSTNFYWPSSQNVNAAAQKEKCGWCFSCKAENDDRDCLFNSVVMPGRELSKSNLVGLQSKNQNAHLRDVICHMLSIEDRLRGLLLGPWLNPHHSKNWRKDLLKASDVASIKCLLLTLESNLRLLALSADWSKHVDSVVTMGSACHISSRTSSRHYIARKRSRYSDIESNSSNTSGLGTYWWRGGRLSRHLFNWKVLPRSLVTKAARKAGCSKIPGILYPENSDFARRSKYITWRAAVETSISIEQLAIQVRELDSNIRWHDIENTHPLYVLDKESRKSIRLFKKVIVRRKSTERESVKYLLDFGKRRAVPDVVTKHGSLLEQPSSDRKKYWLGEPYVPLHLIKNFEDKRIARKSNEMKPGKVLENCGLNKRVPKKQGFSYLFSRLERSDYYQCGHCNKDIPIREAVSCLYCKGFFHKRHARKSGGTTKCTYTCHRCQEGMHVKANSKRRKVEPKQGKTQSQKCLKAPSVGRPVNHKGNKKSSKKGRQSKSQANKKLPSIPLRRSARKAKCLSLQNKRKGGRKKGKKIKSRKVTSRKPKETTTQSKELAVTSERKKRTHVSHSYWLNGLWLSRKPNDERVMLFREKKHLAPCEGFSGTIDEPKCHLCCGYGNTSNYIACEICGEWFHGDAFGLTLENVRQLIGFRCHVCRDRAAPVCPHVNSNALGHAETNAATECAEELSNPVSLQPLSEV 1734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 55 102 - -
Bisa05g2761 1734 SUPERFAMILY FYVE/PHD zinc finger 1639 1694 IPR011011 -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 120 184 - -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 1577 1596 - -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 145 164 - -
Bisa05g2761 1734 SMART PHD_3 695 738 IPR001965 -
Bisa05g2761 1734 SMART PHD_3 1645 1692 IPR001965 -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 1552 1576 - -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 908 956 - -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 274 309 - -
Bisa05g2761 1734 CDD PHD1_AIRE 695 737 - -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 82 97 - -
Bisa05g2761 1734 ProSiteProfiles Zinc finger PHD-type profile. 693 740 IPR019787 -
Bisa05g2761 1734 Pfam PHD-finger 696 738 IPR019787 -
Bisa05g2761 1734 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 687 755 IPR013083 -
Bisa05g2761 1734 ProSiteProfiles DDT domain profile. 498 558 IPR018501 -
Bisa05g2761 1734 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1639 1698 IPR013083 -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 1486 1596 - -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 908 946 - -
Bisa05g2761 1734 SUPERFAMILY FYVE/PHD zinc finger 673 741 IPR011011 -
Bisa05g2761 1734 Pfam DDT domain 501 554 IPR018501 -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 1519 1533 - -
Bisa05g2761 1734 PANTHER PHD FINGER FAMILY PROTEIN 2 1697 - -
Bisa05g2761 1734 SMART testlast3 498 558 IPR018501 -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 397 440 - -
Bisa05g2761 1734 ProSitePatterns Zinc finger PHD-type signature. 696 737 IPR019786 -
Bisa05g2761 1734 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2761 Bisa-ChrBisa05 66431598 66454460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2761 1 1704 PHD Transcription Factor Family AT5G12400 40.694 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bisa05g2761 DDT 1.7e-11 No_clan