Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2738 ATGGGCTGCGTGAGGGACAGAGTTCGTGAGGCAGAGAAAGAGAGGCAGAAGCTCGCAAATAGCAGGAAAATGGTGAAATTTCTGAAGCCAAACAAAGCCGTTATCGTCCTTCAGGGGCGCTACGCCGGTCGCAAGGCCGTGATCGTACGCACATTCGACGAAGGCACTCGCGACCGGCCCTACGGCCACTGCCTCGTCGCCGGAATCAAGAAGTATCCTAGCAAGGTCATCAAGAAGGATTCCACCAAGAAGACGGCTAAGAAATCTCGTGTCAAGGCCTTCGCGAAGCTCGTGAACTTTCAGCACCTCATGCCCACGCGATACACCCTCGACGTGGATCTCAAGGATGTCGTCACCATCGATGCCCTTCAGTCTAAGGACAAGAAGGTAACTGCGTTGAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGCAAGAACAGGTGGTTCTTTACCAAGCTTAGGTTCTGA 477 0.5346 MGCVRDRVREAEKERQKLANSRKMVKFLKPNKAVIVLQGRYAGRKAVIVRTFDEGTRDRPYGHCLVAGIKKYPSKVIKKDSTKKTAKKSRVKAFAKLVNFQHLMPTRYTLDVDLKDVVTIDALQSKDKKVTALKETKKRFEERFKTGKNRWFFTKLRF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2738 158 Coils Coil 123 143 - -
Bisa05g2738 158 SUPERFAMILY Translation proteins SH3-like domain 25 158 IPR008991 -
Bisa05g2738 158 Gene3D - 24 158 IPR038655 -
Bisa05g2738 158 PANTHER 60S RIBOSOMAL PROTEIN L27 24 158 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bisa05g2738 158 Coils Coil 1 21 - -
Bisa05g2738 158 CDD KOW_RPL27 29 111 IPR041991 -
Bisa05g2738 158 Pfam Ribosomal L27e protein family 75 158 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bisa05g2738 158 SMART kow_9 27 54 IPR005824 -
Bisa05g2738 158 ProSitePatterns Ribosomal protein L27e signature. 147 158 IPR018262 GO:0003735|GO:0005840|GO:0006412
Bisa05g2738 158 FunFam 60S ribosomal protein L27 24 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2738 Bisa-ChrBisa05 65328902 65329483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2738 24 158 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 82.963 2.73e-81 234