Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2737 ATGCATGTCGTGAAAACAAGACTTGAGATGGGTTTTTCTGAGTGCGAGAGGGACAGAGTTCGTGAGGCAAAGAAAGAGAGACAGAAGCTCGCAAATAGCAGGAAAATGGTGAAATTTCTGAAGCCAAACAAAGCCGTCATCGTCCTTCAGGGGCGCTACGCCGGTCGCAAGGCCGTGATCGTACGCACATTCGACGAAGGCACTCGCGACCGGCCCTACGGCCACTGCCTCGTCGCCGGAATCAAGAAGTATCCTAGCAAGGTCATCAAGAAGGATTCCGCCAAGAAGACGGCCAAGAAGTCTCGCGTCAAGGCCTTCGTGAAGCTCGTGAACTTCCAGCACTTGATGCCCACGCGCTACACCCTCGACGTGGATCTCAAGGACGTAGTGACCATCGACGCCCTTCAGTCTAAGGACAAGAAGGTCACTGCCTTGAAGGAGAGCAAGAAGAGGTTCGAGGAGAGGTTCAAGACGGGCAAGAACAGGTGGTTCTTTACCAAGCTTAGGTTCTGA 513 0.5322 MHVVKTRLEMGFSECERDRVREAKKERQKLANSRKMVKFLKPNKAVIVLQGRYAGRKAVIVRTFDEGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNFQHLMPTRYTLDVDLKDVVTIDALQSKDKKVTALKESKKRFEERFKTGKNRWFFTKLRF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2737 170 Pfam Ribosomal L27e protein family 87 170 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bisa05g2737 170 Coils Coil 135 155 - -
Bisa05g2737 170 SMART kow_9 39 66 IPR005824 -
Bisa05g2737 170 Coils Coil 13 33 - -
Bisa05g2737 170 CDD KOW_RPL27 41 123 IPR041991 -
Bisa05g2737 170 Gene3D - 36 170 IPR038655 -
Bisa05g2737 170 PANTHER 60S RIBOSOMAL PROTEIN L27 36 170 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bisa05g2737 170 SUPERFAMILY Translation proteins SH3-like domain 37 170 IPR008991 -
Bisa05g2737 170 ProSitePatterns Ribosomal protein L27e signature. 159 170 IPR018262 GO:0003735|GO:0005840|GO:0006412
Bisa05g2737 170 FunFam 60S ribosomal protein L27 36 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2737 Bisa-ChrBisa05 65321485 65326313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2737 36 170 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 83.704 7.44e-83 239