Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2714 ATGGGAAATTGCTGCATAAAACCCGTCGCTCATGTGTCTTCCTCTAACATTTCTGGAAAGGCAAAGTCTCAGAGTAAGCCAAATCAGAATTCAAATTCTTCAGAACCAAAAGTTGCATTGCCAAGTTTAGAACCAAACAACAACAGATCCATCTCTAATAGTCTTAAATCCTTCAGCTTAAATGATCTAAAGGAAGCCACAAAGAACTTCCGACAAGAAAACTTAATCGGGGAGGGAGGGTTCGGGTTTGTTTACAAGGGATGGATTGACGAGAACTCCTTTGCTCCCACAAAACCAGGTAGTGGGATCATGGTGGCCATTAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGCCAACTTCATCACAAAAATTTAGTGAAACTTATTGGTTACTGCTCAGACGCTAAAAACAGGCTTCTAGTTTATGAGTTTATGCCGAAAGGAAGTTTGGAGAATCATTTATTTAGAAAAGGTGTTCAACCCATATCCTGGGCAACACGGATCAATATTGCAGTTGGTGTTGCAAGAGGCTTAGCATTTTTGCATACGTTAGATTCAAATGTTATCTATCGTGATTTAAAGACCGCCAATGTTTTACTTGATTCGGATTTCAATGCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGCCCTACTGGAGATAACACTCATGTTTCAACCAGAATTATCGGAACTCAAGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCACTTAACCTTAAGGAGTGATGTATACAGCTTTGGCGTTTTCTTGGTAGAGTTACTAACAGGGAGACGGGTGATCGAGGGCAACAGACCTGGAACTTCGCAAGAAACTCTGGTGGATTGGGCGAGGCCATTTCTGAATGACAGCAGGCGAGTTTCAAGAATCATGGATATCAGGTTGGGTGGTCAATACTCCAAAAAAGGAGCCCAAGCTGTTGCTGAACTTGCCTCGCGATGCCTAAATACAGATCCTAAACATAGACCGGGTATGGTAGATGTTCTAGCCTCACTGGAAGAACTTCATTCCTCAAACACAAAAATTCCTAGGACCCCACCAAGATCTGGAACTGGGAATCGTGGTATCAAGCATTCTAGTCATTCCAAAAAGTCAATGAGAAACACAAACTGA 1170 0.4222 MGNCCIKPVAHVSSSNISGKAKSQSKPNQNSNSSEPKVALPSLEPNNNRSISNSLKSFSLNDLKEATKNFRQENLIGEGGFGFVYKGWIDENSFAPTKPGSGIMVAIKKLKPESFQGHKEWLAEVNYLGQLHHKNLVKLIGYCSDAKNRLLVYEFMPKGSLENHLFRKGVQPISWATRINIAVGVARGLAFLHTLDSNVIYRDLKTANVLLDSDFNAKLSDFGLARDGPTGDNTHVSTRIIGTQGYAAPEYVATGHLTLRSDVYSFGVFLVELLTGRRVIEGNRPGTSQETLVDWARPFLNDSRRVSRIMDIRLGGQYSKKGAQAVAELASRCLNTDPKHRPGMVDVLASLEELHSSNTKIPRTPPRSGTGNRGIKHSSHSKKSMRNTN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2714 389 CDD STKc_IRAK 76 354 - -
Bisa05g2714 389 MobiDBLite consensus disorder prediction 355 375 - -
Bisa05g2714 389 SUPERFAMILY Protein kinase-like (PK-like) 46 352 IPR011009 -
Bisa05g2714 389 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Bisa05g2714 389 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 364 - -
Bisa05g2714 389 SMART serkin_6 70 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2714 389 FunFam Serine/threonine-protein kinase BIK1 39 155 - -
Bisa05g2714 389 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2714 389 Pfam Protein kinase domain 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2714 389 MobiDBLite consensus disorder prediction 15 47 - -
Bisa05g2714 389 Gene3D Transferase(Phosphotransferase) domain 1 156 365 - -
Bisa05g2714 389 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Bisa05g2714 389 PANTHER OS01G0588500 PROTEIN-RELATED 29 355 - -
Bisa05g2714 389 MobiDBLite consensus disorder prediction 355 389 - -
Bisa05g2714 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2714 Bisa-ChrBisa05 64851227 64855846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2714 46 351 Glycoside Hydrolase AT3G07070 50.161 1.49e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa05g2714 Pkinase 2.6e-48 CL0016