Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2702 ATGCTGTTTCTTGCATTCTCCACTTTCTCAGAAATTAGAATCACAGTAGGAGCCACAAGTAACATGATGGGTGGGAGTGATGCTCCAAAAATGCCCAAAGGCCGGCGGTCCTTATCATCAGTTGAAGAAGCAAGTTCCAAAGGTAACTTGGGAGGAGAAGGTCCTTTGAAGAAAGGCCCGTGGACGGCAGCTGAGGATGGAATTTTGGTAGAGTATGTCAGAAAACATGGAGAAGGAAATTGGAATGCAGTCCAAAAGCACTCAGGCCTTGCCCGCTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCACCTGAGGCCAGACTTAAAAAAGGGTGCATTTACAGCAGAGGAAGAGAGTCGAATCATTGAACTCCATGCTAAGATGGGAAACAAATGGGCTCGAATGGCGACAGAGCTGCCTGGACGTACAGATAATGAGATAAAGAACTATTGGAATACTAGAATTAAGAGAATGCAACGAGCTGGCCTACCGATTTATCCCGCTGACATATGCCAGCGGGTATTGCTGGGCAGCCAAGAAAGTCCAAATGCGGGTACTATGATGAGTGGAGCCAGCCAGCATTCTGATCTCTCACAAGCAGACAATTTCAACATCCCAGACCTGGATTTCAAAAATTATAATTTCAGACAGGGTTATTTACCATATGGACCTTCAATTTTGGATATTCCTGAAAGCAGCTTGTTCGAACAAATAGCAGGCTCACCCCATAATAATATAATGTTGCCAACTATGCATCCTCCCAAACGCCTTCGGCACTCAGATGTGATTTGCAGTAGATTGGACAATAGTAGCAGCTGCGTGGTCCCAGCATTTGATCAGTTCGATGATTATATTGCTGAGCCACCTCATCATTTGTCATCTCCACGTGATCCGATCCTTAACACCAATGATCAGTTTCATGATGACAACCTTCATGGCAGCCATGCCTCTTTAAATGGCAATGACTCTTCTTCAGCGCCCATATCTGAGGCAATGAAGTCGGAGCTCCCTTCACTCCAATATTTAGAAACTCAACAAGGTAGATGGGCCACACATGCATCCCCACTTCCTTCACTGGAGTCTGTTGATATTCAATCTTCTCCAGCTGAACAGTATCAGTCATGCACTGTTTCTCCTCAAAGCAGTGGCTTGTTGGAAGCAATAATCTATGAATCCAAGATTCCAAAAACTTCAGATAATGACTCTTTGTGGCAGACTCCTGATAATTGCTTCCTGAATGATGTAGTTAAAACCCTGAATCCCTGTGAGACAGAATGGGATCAACAGGGGGACGTAACATCTGTTCTTTCTGATTATACTCCTATTAGCATGTGCTCAGTTGATGACCCTCCCTTGGTTGAACTCACACAAGGTTGTGACGTAAAGCACAAAACAGTTTTACAGGGTCCACCTTCCTTTTCTGGACAGAAAGAAACTACTTTAAGTCAGATAGACGTTACAAGGCCAGATGCTTTGCTTGACATGAGTTGGCTTGGGGATGAACTCAGTTTTAGCAAGGATCAGTGTGATCTAAAATATGCTTTAAGTTCATTTGTTGGTGAAGATTTACATCATGAACCTTCAGTTATGATGGACAGGAGGTTTCAGATCAGATATTCTGACGTTAACAATGGTTTGAAGATGATGCTGCCGATGGTGTAG 1665 0.4402 MLFLAFSTFSEIRITVGATSNMMGGSDAPKMPKGRRSLSSVEEASSKGNLGGEGPLKKGPWTAAEDGILVEYVRKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTAEEESRIIELHAKMGNKWARMATELPGRTDNEIKNYWNTRIKRMQRAGLPIYPADICQRVLLGSQESPNAGTMMSGASQHSDLSQADNFNIPDLDFKNYNFRQGYLPYGPSILDIPESSLFEQIAGSPHNNIMLPTMHPPKRLRHSDVICSRLDNSSSCVVPAFDQFDDYIAEPPHHLSSPRDPILNTNDQFHDDNLHGSHASLNGNDSSSAPISEAMKSELPSLQYLETQQGRWATHASPLPSLESVDIQSSPAEQYQSCTVSPQSSGLLEAIIYESKIPKTSDNDSLWQTPDNCFLNDVVKTLNPCETEWDQQGDVTSVLSDYTPISMCSVDDPPLVELTQGCDVKHKTVLQGPPSFSGQKETTLSQIDVTRPDALLDMSWLGDELSFSKDQCDLKYALSSFVGEDLHHEPSVMMDRRFQIRYSDVNNGLKMMLPMV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2702 554 MobiDBLite consensus disorder prediction 289 329 - -
Bisa05g2702 554 Gene3D - 57 110 - -
Bisa05g2702 554 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 160 IPR017930 -
Bisa05g2702 554 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 42 510 - -
Bisa05g2702 554 CDD SANT 60 105 IPR001005 -
Bisa05g2702 554 MobiDBLite consensus disorder prediction 297 329 - -
Bisa05g2702 554 SUPERFAMILY Homeodomain-like 56 152 IPR009057 -
Bisa05g2702 554 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 105 IPR017930 -
Bisa05g2702 554 ProSiteProfiles Myb-like domain profile. 53 105 IPR001005 -
Bisa05g2702 554 Gene3D - 113 159 - -
Bisa05g2702 554 SMART sant 110 158 IPR001005 -
Bisa05g2702 554 SMART sant 57 107 IPR001005 -
Bisa05g2702 554 FunFam Transcription factor GAMYB 113 159 - -
Bisa05g2702 554 CDD SANT 113 154 IPR001005 -
Bisa05g2702 554 ProSiteProfiles Myb-like domain profile. 106 156 IPR001005 -
Bisa05g2702 554 MobiDBLite consensus disorder prediction 22 59 - -
Bisa05g2702 554 FunFam MYB-related transcription factor 57 110 - -
Bisa05g2702 554 Pfam Myb-like DNA-binding domain 61 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2702 Bisa-ChrBisa05 64514692 64519946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2702 56 524 MYB Transcription Factor Family AT5G06100 37.910 3.49e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g2702 Myb_DNA-bind_6 1.5e-14 CL0123