Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa05g2685 | ATGGGCAACTGTTGCTCCGGTAAGGGCAGCGATGCCCCGGTATTCGACGACGAAAAGGGAGAAGCAAAAGAAAACAACCAACAGAACAACGCAGGAGACAACCCTGAGGGCACCTCCACCACCCCACCGACGGCGAAGCCAGCTCAGTCGCCGTCTCCGCCTGCTAAAAAGACAGGCCCAATAGGCCCAGTGCTTGGGCGGCCCATGGAGGACGTTAAGGGCACGTATAGCATAGGGAAGGAGCTAGGGCGAGGGCAATTTGGAGTCACGCATTTGTGCACACACAAGGTGACGGGTGAGCAGTTTGCATGCAAAACCATAGCCAAGAGGAAGCTGGTGAACAAGGAGGATATAGAGGATGTGAGAAGGGAGGTCCAGATCATGCACCATCTGGCCGGGCAGCCTAATATTGTCGAGCTCAAAGGTGCCTACGAGGACAAGCAATCCGTCCATCTTGTGATGGAGCTCTGCGCCGGCGGCGAGCTCTTTGACCGGATCATCGCCAAGGGCCATTACACTGAACGAGCTGCCGCCTCATTGTTGCGAACCATAGTTCAGATTGTTCATACTTGCCACTCCATGGGTGTAATCCATAGAGATCTCAAGCCTGAGAATTTTCTCTTGCGTAATAAGGATGAGAACTCCCCTCTCTTGGCCACCGATTTCGGTCTATCAGTTTTTTACAAGCAAGGAGAGATGTTTAAAGACATTGTTGGCAGTGCATATTACATTGCTCCTGAGGTCTTGAGGAGAAAATATGGACCAGAAGTTGACATTTGGAGTGTTGGGGTCATGCTATACATTCTCCTTTGCGGTGTTCCTCCATTTTGGGCAGAATCTGAAAATGGAATATTCAATGCCATCTTAAGAGGCCACATTGACTTTTCAACCGATCCATGGCCCAACATATCACCTGCCGCAAAAGATCTTGTTAGGAAAATGTTGAATTCAGATCCCAAGCAGAGGCTCACAGCCTACCAAGTCTTAAATCATCCATGGATCAAAGAGGATGGAGAAGCACCAGATAAACCTCTTGATAATGCTGTGCTGAATAGGCTCAAGCAGTTCACAGCAATGAACCAATTCAAGAAAGTTGCTCTAAAGGTTATTGCCGGGAACCTATCAGAGGAAGAAATCATGGGGTTGAAGGAAATGTTCAGGGGAATGGACACTGACAATAGTGGAACCATGACAATTGAAGAGCTTAAGCAAGGGCTTGCAAAGCAGGGCACAAAACTCACTGAACAAGAAGTCAAGCAATTAATGGAAGCTGCTGATGCTGATGGAAATGGAACCATAGATTATGACGAGTTCATCACAGCAACAATGCATTTGAACCGACTGAACAAAGAAGAACATCTCTATACTGCTTTTCAATACTTTGATAAAGATAATAGCGGGTTCATTACCGTTGAAGAACTAGATCAGGCTCTCCGAGAATATAACTTGCATGATGGCAGGGACATTAACGAAATCCTACAGGAGGTTGATTCAGATAACGATGGGCGAATTAACTATGATGAGTTTGCAGCAATGATGAGAAAAGGAGGCCCAGAAGTGCAAACAAGGAAGAGGCGTAATGATTCATTTATTGGTTGA | 1599 | 0.469 | MGNCCSGKGSDAPVFDDEKGEAKENNQQNNAGDNPEGTSTTPPTAKPAQSPSPPAKKTGPIGPVLGRPMEDVKGTYSIGKELGRGQFGVTHLCTHKVTGEQFACKTIAKRKLVNKEDIEDVRREVQIMHHLAGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLRNKDENSPLLATDFGLSVFYKQGEMFKDIVGSAYYIAPEVLRRKYGPEVDIWSVGVMLYILLCGVPPFWAESENGIFNAILRGHIDFSTDPWPNISPAAKDLVRKMLNSDPKQRLTAYQVLNHPWIKEDGEAPDKPLDNAVLNRLKQFTAMNQFKKVALKVIAGNLSEEEIMGLKEMFRGMDTDNSGTMTIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHLNRLNKEEHLYTAFQYFDKDNSGFITVEELDQALREYNLHDGRDINEILQEVDSDNDGRINYDEFAAMMRKGGPEVQTRKRRNDSFIG | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa05g2685 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 488 | 519 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | SMART | efh_1 | 417 | 445 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | SMART | efh_1 | 488 | 516 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | SMART | efh_1 | 381 | 409 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | SMART | efh_1 | 453 | 481 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | ProSitePatterns | Protein kinases ATP-binding region signature. | 82 | 109 | IPR017441 | GO:0005524 | |
| Bisa05g2685 | 532 | SMART | serkin_6 | 76 | 334 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa05g2685 | 532 | Pfam | EF-hand domain pair | 451 | 514 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | Pfam | EF-hand domain pair | 382 | 442 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
| Bisa05g2685 | 532 | SUPERFAMILY | EF-hand | 373 | 514 | IPR011992 | - | |
| Bisa05g2685 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
| Bisa05g2685 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 362 | IPR011009 | - | |
| Bisa05g2685 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 497 | 509 | IPR018247 | - | |
| Bisa05g2685 | 532 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 71 | 509 | - | - | |
| Bisa05g2685 | 532 | FunFam | Calcium-dependent protein kinase 1 | 342 | 517 | - | - | |
| Bisa05g2685 | 532 | CDD | STKc_CAMK | 76 | 333 | - | - | |
| Bisa05g2685 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 449 | 484 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | ProSiteProfiles | Protein kinase domain profile. | 76 | 334 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa05g2685 | 532 | FunFam | calcium-dependent protein kinase 1 | 162 | 341 | - | - | |
| Bisa05g2685 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 390 | 402 | IPR018247 | - | |
| Bisa05g2685 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 377 | 412 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 78 | 161 | - | - | |
| Bisa05g2685 | 532 | Gene3D | - | 342 | 516 | - | - | |
| Bisa05g2685 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 413 | 448 | IPR002048 | GO:0005509 | |
| Bisa05g2685 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 162 | 341 | - | - | |
| Bisa05g2685 | 532 | Pfam | Protein kinase domain | 76 | 334 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa05g2685 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 426 | 438 | IPR018247 | - | |
| Bisa05g2685 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 462 | 474 | IPR018247 | - | |
| Bisa05g2685 | 532 | MobiDBLite | consensus disorder prediction | 25 | 45 | - | - | |
| Bisa05g2685 | 532 | FunFam | Calcium-dependent protein kinase 1 | 78 | 161 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa05g2685 | Bisa-ChrBisa05 | 64167427 | 64173706 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa05g2685 | 1 | 530 | EF-hand Containing Proteins | AT5G12180 | 80.566 | 0.0 | 893 |
Transcription factors information