Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2676 ATGCCACATTTGCGTCATCTGCGAGAGTTTGCAATCCTCTTTCGACATCCAGCTGATGCTGCTTGCAAAGTCTCGTTTGTCACAGAAGACCGACCCCCTCGGATAGTGGCTGGAGCTGTGATTCACCCAGATATGAAATTTGGATGTCTGGTGAGTGTGAGCTTGAAACTATCAGTTAATACTCAATTTGTATATATCATACATTCACCAAAACGTGGAGACCCGGACATGGGAACAGGAAACTTTATATGGAATTTTACAAAGAAATTTATCACATTCGGGCTCATTACAGTGACAGTGTCTGATCGTTATGTGACCATTGTTCCAGTTCGTGGAGGCTCCATGTCTCCCACATTTAATCCTAAAACCAGTTCATCAATGGGAAATAATTCTGATGACTATGTTTTGGTTGAAAAATATTGCCTCAACAACTACAAGTTTTCCCACGGTGATATAGTGGTATTCCGCTCCCCGTTGAATCACAAGGAGACACACATAAAGAGAATAGTTGCATTACCTGGTGAGTGGTTTGGTGCCCATCGTAACTATGATGTGCTGAAGGTTCCAGAAGGACATTGTTGGGTCGAGGGAGACAATGCAGCTTCTAGCATGGATTCAAACTCATTTGGTCCTATTCCTTTGGGTCTAGTTCGAGGAAGAGTGACCCGCATTGTATGGCCTCCTCAAAGAATGGGTGCAGTAAAGAAGACTCCACCAGAAGGATTATCTTCTTAA 735 0.4327 MPHLRHLREFAILFRHPADAACKVSFVTEDRPPRIVAGAVIHPDMKFGCLVSVSLKLSVNTQFVYIIHSPKRGDPDMGTGNFIWNFTKKFITFGLITVTVSDRYVTIVPVRGGSMSPTFNPKTSSSMGNNSDDYVLVEKYCLNNYKFSHGDIVVFRSPLNHKETHIKRIVALPGEWFGAHRNYDVLKVPEGHCWVEGDNAASSMDSNSFGPIPLGLVRGRVTRIVWPPQRMGAVKKTPPEGLSS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2676 244 Pfam Signal peptidase, peptidase S26 185 226 IPR019533 GO:0004252|GO:0006465
Bisa05g2676 244 Pfam Signal peptidase, peptidase S26 85 175 IPR019533 GO:0004252|GO:0006465
Bisa05g2676 244 CDD S26_SPase_I 107 221 IPR019533 GO:0004252|GO:0006465
Bisa05g2676 244 PRINTS Bacterial leader peptidase 1 (S26A) family signature 165 177 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g2676 244 PRINTS Bacterial leader peptidase 1 (S26A) family signature 188 207 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g2676 244 PRINTS Bacterial leader peptidase 1 (S26A) family signature 103 119 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g2676 244 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 77 240 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Bisa05g2676 244 FunFam Mitochondrial inner membrane protease subunit 101 239 - -
Bisa05g2676 244 SUPERFAMILY LexA/Signal peptidase 105 234 IPR036286 -
Bisa05g2676 244 Gene3D Umud Fragment, subunit A 102 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2676 Bisa-ChrBisa05 63893685 63901628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2676 115 238 MADS-box Gene Family AT1G29960 38.462 1.00e-19 80.1