Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2673 ATGACAAGTGTGAGACGCGCTGTGGGGAAATGCACGCGCCAAGAAGGAAGGAAGAAAAACGCTCACATCACATTAGTTGTGGCTACTACAAGGAGGCTGCCTTCCGATTCTGGTGGTGCCTTCGCAGACTGGGCAGCCACATCGTCCTCCGCCGCCGCCGCCGCCGGACGAGTCGCCGCCCCGGACGACCTCTCCCTGGGCTTCAATGCTGGACCCACCGCCGCAGCGGTCGGAGGAGGAGGAAATTCCATCGGAATGTGGCCAGGCGCTGCGTCTAGGTCTTTCAACTACGGCCACCCCCCTCATCCGGAGATGGGCATGGTGGGCCTCCGAGACGTCTTCGTGGTGGCTCCGGCATCCTCTTTCCACCCCACCACCACCAACAACCATCACAACGACGTTGTCATGCCCGATCCCCATGCCGCCACCATCCACGGCCTCGGCGTCGGCGTCATCCCCCTCCTCACGGCGTCTCCTTGTCTCGGCCTCGACAACGATAACACCACCGCCACCGCAGCTACCACCGCCATGCTCGTCAATCACAACCGAAGCCGCAGCGGCGGAATTCAGCTCTGGCAGGATCATTACCCGAAGAAACAACCCCTCTTCGACCACAACAGCACCTCCTCCGGCGACCTACCCCACACAGCGGGCAACGGTGGCGGGATAACCGGCTCAGGTATCAGCTCAGGAGGGACCACGTGCCACGACTGCGGGAACCAGGCGAAGAAGGATTGTAGTCACAAAAGGTGCAGGACGTGCTGCAAGAGCCGAGGCTTCGATTGCCCTACTCACGTGAAGAGCACGTGGGTCCCTGCTTCTCGCCGGCGAGAACGCCAGCTCATGGCTGCCGCGGGGGCCGCAACTGCCGTCGGTGGTGGCTCCACTGGGTCCACCTCCGCTACCAAGAAGCCTAGACTCATCGCTTCACAAACCACCTCCCATACTTCCACATCTAACACAACTCCTCCTCGCAGCTTCGACACGAGCTCTAGCCATCAAGATGCGACCTTCAGGGAGTCATTACCAGGACAAGTGCGAGCGCCGGCGGTGTTCAAGTGCGTCCGGGTGACGGCGATGGACGGCGGGGACGACGAGTATGCTTATGAGGCGGTTGTGAAGATTGGAGGTCATGTGTTCAAAGGGTATCTGTCTGATCAAGGCGTTGAGAATAGAGATAGTTATCCTAATCTATCGGAGCTGCATTTGGGCGGTGGCCGTGGAGGAGACGGTGAAAGCGGCGGGGGCGACGGCGGGGCCGTGCGAGATGGAGCCACCTCTTCGTCCCCAATGCTGGATCCTTCTGATGTTTATGCTGCAGCTTCAGGCGGAGGGTTCCTTGCAGGTTCAACCTATGGTAATCCCATAAATTGA 1374 0.6019 MTSVRRAVGKCTRQEGRKKNAHITLVVATTRRLPSDSGGAFADWAATSSSAAAAAGRVAAPDDLSLGFNAGPTAAAVGGGGNSIGMWPGAASRSFNYGHPPHPEMGMVGLRDVFVVAPASSFHPTTTNNHHNDVVMPDPHAATIHGLGVGVIPLLTASPCLGLDNDNTTATAATTAMLVNHNRSRSGGIQLWQDHYPKKQPLFDHNSTSSGDLPHTAGNGGGITGSGISSGGTTCHDCGNQAKKDCSHKRCRTCCKSRGFDCPTHVKSTWVPASRRRERQLMAAAGAATAVGGGSTGSTSATKKPRLIASQTTSHTSTSNTTPPRSFDTSSSHQDATFRESLPGQVRAPAVFKCVRVTAMDGGDDEYAYEAVVKIGGHVFKGYLSDQGVENRDSYPNLSELHLGGGRGGDGESGGGDGGAVRDGATSSSPMLDPSDVYAAASGGGFLAGSTYGNPIN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2673 457 MobiDBLite consensus disorder prediction 394 433 - -
Bisa05g2673 457 Pfam Domain of unknown function (DUF702) 232 390 - -
Bisa05g2673 457 MobiDBLite consensus disorder prediction 284 342 - -
Bisa05g2673 457 MobiDBLite consensus disorder prediction 292 339 - -
Bisa05g2673 457 NCBIfam LRP1 C-terminal domain 342 389 IPR006511 -
Bisa05g2673 457 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 168 440 IPR007818 GO:0003700|GO:0006355
Bisa05g2673 457 NCBIfam putative zinc finger domain, LRP1 type 234 276 IPR006510 -
Bisa05g2673 457 MobiDBLite consensus disorder prediction 202 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2673 Bisa-ChrBisa05 63841836 63844545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2673 27 437 C2H2 Transcription Factor Family AT5G12330 46.189 6.64e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa05g2673 DUF702 1.7e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g2673 05 63841836 63844545 Bisa05g2673 05 63841836 63844545 ECH