Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2666 ATGGAAGAATCAAGCAAATTGCAATCAGAAGAGAATAAAGCTTCTATGGAGAAGAATAAGAAAAGAAGGCTCAAAACACCAACCCAGCTTATGGCCCTGGAAAATTTTTATGATGAGCACAAATATCCCACTGAGGAAATGAAATTAGAACTTGCTGAGGAGTTAGGCTTGACAGAAAAACAAATATCTGGATGGTTTTGTCACAGAAGGTTAAAAGATAAAAGACTGTTGAAAGATGAAACATGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTCATCCAGGACCGTGGAAGTGGACCAGGGCAAGATTCTTGTGGAAGCACTAAACATGATAGGCATCTTGATCCGAAAGAGGTTGAGAGTCATGGCCTCTATGGTCATGACTTTCCTGTTGCAGATATGACCTATGAACGTAGGAGCCGGTATACTGAAAATGTTAGTGCAAGGGATAACACATCATCTGAGAGTAGCTCATCTTTACAAGATCAGTTTTTGCAAGGCCAGGATCTATATAATATGGAGCCTTCTAGATATCTGACACCTAGCAGAGCTCTTCCACCTTTAAGTCCTAAAGCTGCTATTAACATGGGATATAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGCTGCTATAACTGCTGTCAAGAAGCAATTAGGAAGGCATTACCAGGAAGATGGTCCACTACTTGGTGTAGAATTTGATCTACTTCCTCCGGGGGCTTTTGAGTGTCAAATTGCAGATCCAGTTCATGAATCATTTCATATAGCAAATCCTGCTCTTCCTAGTCCTCCAGAAATTTCTGCTGTGAAAAGGGAACCACATAGCTCTAGGTATGATTCTAAATATAGTTCCCAAGATTCACATATGGAGGTAGCAGATTTTGGCCCCTTGCATGACTCTGATTTCCAGGATAAGAAATCCCGCCAGCACACAAAGCAAAGGCGTGCATTTCACAGTCATACCAATCATTTGCTACGCAGGAATTCCTCCCTGGAATTATACGAAGATTCTAATGGAGAAGCATATGCTTATAATATAAGTAAGAATCATACAATGGGCACCAAACATGGTGAAGGGATGAGATCTGATTCTGCATCTAACCATAGTGATCACTGTGAAGGAGACCTTGTGGTTAAGCAGACTGAGTCATTGTTGCATTGCTATGATAATGTCAATCCAAAGAATGTTGAGAGGAGTGAATATGTAAAATCCAAGCCATCAAAATCATTACGTAATTCTCGCATTTCTGTTGATGTTGAAGAAAGAGGACTTTCTTCAAGGATAGCAAAGGAAGAGAAGTTTAATGGAGAGAAAAAGGCAAGAAAACGATATCATGATTTAGAAAAAGTAAGGGTGCTTCCAAATGAAACTATGATTGCAAAACGAGATAAAGATGATCTTCCTCAACCACAATATGTGAAACATGCACCTGTTGCTGAGATGAAACCTTGGAAAGATCGGAGATCTGCAGCAGAAAAATCGTTTAGCTACAGCGAGGATGAAACTGCCGAAACCAGTTCCTCTCTGGATTAA 1548 0.4012 MEESSKLQSEENKASMEKNKKRRLKTPTQLMALENFYDEHKYPTEEMKLELAEELGLTEKQISGWFCHRRLKDKRLLKDETCANGRQDRSSGVIQDRGSGPGQDSCGSTKHDRHLDPKEVESHGLYGHDFPVADMTYERRSRYTENVSARDNTSSESSSSLQDQFLQGQDLYNMEPSRYLTPSRALPPLSPKAAINMGYKPSGYLKVKGEIENAAITAVKKQLGRHYQEDGPLLGVEFDLLPPGAFECQIADPVHESFHIANPALPSPPEISAVKREPHSSRYDSKYSSQDSHMEVADFGPLHDSDFQDKKSRQHTKQRRAFHSHTNHLLRRNSSLELYEDSNGEAYAYNISKNHTMGTKHGEGMRSDSASNHSDHCEGDLVVKQTESLLHCYDNVNPKNVERSEYVKSKPSKSLRNSRISVDVEERGLSSRIAKEEKFNGEKKARKRYHDLEKVRVLPNETMIAKRDKDDLPQPQYVKHAPVAEMKPWKDRRSAAEKSFSYSEDETAETSSSLD 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2666 515 MobiDBLite consensus disorder prediction 83 115 - -
Bisa05g2666 515 MobiDBLite consensus disorder prediction 1 27 - -
Bisa05g2666 515 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Bisa05g2666 515 MobiDBLite consensus disorder prediction 143 163 - -
Bisa05g2666 515 MobiDBLite consensus disorder prediction 262 328 - -
Bisa05g2666 515 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Bisa05g2666 515 Gene3D - 8 92 - -
Bisa05g2666 515 MobiDBLite consensus disorder prediction 1 24 - -
Bisa05g2666 515 MobiDBLite consensus disorder prediction 484 504 - -
Bisa05g2666 515 MobiDBLite consensus disorder prediction 463 515 - -
Bisa05g2666 515 SUPERFAMILY Homeodomain-like 18 84 IPR009057 -
Bisa05g2666 515 MobiDBLite consensus disorder prediction 275 313 - -
Bisa05g2666 515 SMART HOX_1 18 80 IPR001356 GO:0003677
Bisa05g2666 515 CDD homeodomain 20 75 IPR001356 GO:0003677
Bisa05g2666 515 MobiDBLite consensus disorder prediction 86 106 - -
Bisa05g2666 515 MobiDBLite consensus disorder prediction 147 163 - -
Bisa05g2666 515 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2666 Bisa-ChrBisa05 63660785 63667025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2666 3 515 Homeobox Transcription Factor Family AT4G03250 40.223 3.80e-84 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bisa05g2666 Homeodomain 3.1e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g2666 05 63660785 63667025 Bisa05g2666 05 63660785 63667025 ECH