Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2641 ATGAGGCTTTCTTCCACCGGACTAGGTCAACCGGCTCAAGAGGGGGAGAAAAAATGTTTAAACTCTGAACTATGGCATGCATGTGCTGGGCCTCTGGTGTCTCTGCCTCCTGTTGGAAGTCGTGTAGTCTACTTTCCCCAAGGTCACAGTGAGCAGGTTGCTGCTTCAACAAACAAGGAGGTAGATGCACATATTCCCAATTATCCTAACTTGCCACCACAGCTTATTTGTCAGCTTCACAATGTAACAATGCATGCAGATGTGGAAACAGATGAAGTATATGCACAAATGACTCTGCAACCTTTAAGTCTGCAAGAGCAAAAGGATGTCTATCTACTGCCTACAGAACTGGGTAATCCTAGCAAACAACCAACCAACTACTTCTATAAAACATTAACTGCAAGTGATACCAGCACTCATGGAGGATTCTCTGTTCCACGAAGAGCAGCTGAGAAAGTCTTCCCTCCTCTTGATTACACACAACAGCCTCCTGCACAAGAACTAATTGCTAGGGATCTTCATGATAATGAATGGAAATTCAGACATATTTTTCGAGGTCAGCCCAAGAGGCATCTTCTTACTACAGGGTGGAGTGTCTTTGTTAGTGCTAAGAGGCTTGTTGCTGGTGATTCAGTCCTTTTTATCTGGAATGACAAAAATCAATTACTCTTGGGTATTCGGCGAGCAAATCGTCCACAGACTGTCATGCCATCATCGGTTCTGTCAAGTGATAGCATGCACATAGGTCTTCTTGCTGCCGCAGCTCATGCAGCTGCCACAAATAGCCGCTTTACTATATTCTACAACCCTAGGGCAAGCCCCTCGGAATTTGTCATTCCCTTGGCCAAGTATGTTAAAGCTGTATATCATACTCGAGTTTCTGTTGGCATGAGATTTAGGATGCTCTTTGAGACAGAAGAATCAAGTGTACGTCGATACATGGGTACTATAACAGGCATTAGTGATTTAGATCCTGTACGCTGGTCAAATTCATATTGGCGTTCTGTGAAGGTTGGCTGGGATGAGTCCGCTGCAGGGGAGAGGCAGCCAAGAGTCTCCTTGTGGGAGATTGAACCTTTGACAACCTTTCCAATGTATCCATCCCCATTCCCTTTGAGGCTGAAACGCCCTTGGCCATCAGGACTACCTTCTTTTCATGGTCTCAGGGATGGTGACATGAGCATTAGTTCTCCATTCATGTGGCTTCAAGGCAGGCTTGGGGATCAAGGAATGCAATCTCTGAACTTCCAGGGACTTGGCGTTACACCATGGATGCAGCCAAGACATGACGCTTCTATATCAGGTCTCCAGCCAGAGATATTCCAAGCAATGGCTGCCGCTGCACTCCAGGAAATGAGGGCAATAGATTCATCTAAATCTTCATCCCAATCTCTGTTGCAGTTCCAGCAGTCTTCAAATGTTCCTGGTGCTCCTACATCTGGAATTCAGAGGCAAGTGTTACAGCAGTCCCAGTCCCAAACTACCCTTCTACAAAACTTTCAAGAAAACCAAAATCCTGTTCAGTCTTCACTTCTGCAACGACAGTTGCAGCGTTACCATCCATATAATGACCAGAGGCAGCAGCAGCAGCAACAACTTAACAATTTGCCTGTTCAGCAGCAGATCTCAAATGTAATCTCTCCTTTGTCTAATTTTGCCTCGGCAACCCAGTCTCACTCTCCATCCATGCAAGCAATAGCTTCAAATTGCCAGCCGCAGGGTTTTCCTGAATCTGTCAGGAACCAAATTTCCAGCTCTGATGTTTCTCCCATCCACGGTCTATTAGGATCATTTTCCCAGGATGGAGGATCCCAGTTGCTTAATTTGAATGGATCCAACTCTGTGGTCTCCCCTGCTTCCTTACTACCCCAGCAAATAACTGTTGCACCTCAGCTTCAATCTTCTGCTGCTCAGTGTGTATTGCCCCAGGTGGAAAACTTGGGAACACCACAATCAAATGTATCTGAACTTCCTATTTTGCCTCCATTTCCTGGAAGAGAATATTCTGCTTACCAAGGTGCTACTGATCCTCAGAGCAATCTTTTGTTTGGGGTTAACATTGATCCTTGTCTAATGTTACAAAATGGCATGCCAAACCTGAGAAATGTTGGTACTGAGAATGGTTCACTATCAATGCCATTTTCTGCTTCAAACTTTGCTGGTGCTACTGGGACTGAATTTCCACCAAGTTCAGACATGACAACATCAAGTTGTGTGGATGAATCAGGCTTTTTGCAGTCTTCTGAAAATGTAGACCAAGCAAACACATCAACTAGAACCTTTGTCAAGGTTCACAAGTCAGGGTGCTTTGGGAGGTCACTGGACATCTCTAAGTTCAGCAGCTATGATGAACTGCGCAGTGAACTTGCCCGCATGTTTGGCCTTGAAGGCCAACTAGAGGACCCTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGATGACCCTTGGCAGGAGTTTGTGAACAATGTGGCGCACATCAGGATACTGTCTCCACTTGAAGTGCAACAAATGGGCAAAGAAGGTCTTGCTGTCGCTGCTTCTGCGCCAGGTCACAAGCTTTCTACTAGTAGTAACACTTGCGATAACTATCCGGGTCGACAAGAGTTGAGAAGTTCGAGGAATGGAATTGCGTCAATGTGGTCTTTTGACTACTAA 2685 0.4559 MRLSSTGLGQPAQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSLQEQKDVYLLPTELGNPSKQPTNYFYKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSYWRSVKVGWDESAAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSFHGLRDGDMSISSPFMWLQGRLGDQGMQSLNFQGLGVTPWMQPRHDASISGLQPEIFQAMAAAALQEMRAIDSSKSSSQSLLQFQQSSNVPGAPTSGIQRQVLQQSQSQTTLLQNFQENQNPVQSSLLQRQLQRYHPYNDQRQQQQQQLNNLPVQQQISNVISPLSNFASATQSHSPSMQAIASNCQPQGFPESVRNQISSSDVSPIHGLLGSFSQDGGSQLLNLNGSNSVVSPASLLPQQITVAPQLQSSAAQCVLPQVENLGTPQSNVSELPILPPFPGREYSAYQGATDPQSNLLFGVNIDPCLMLQNGMPNLRNVGTENGSLSMPFSASNFAGATGTEFPPSSDMTTSSCVDESGFLQSSENVDQANTSTRTFVKVHKSGCFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVAHIRILSPLEVQQMGKEGLAVAASAPGHKLSTSSNTCDNYPGRQELRSSRNGIASMWSFDY 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2641 894 FunFam Auxin response factor 292 364 - -
Bisa05g2641 894 SUPERFAMILY DNA-binding pseudobarrel domain 113 257 IPR015300 -
Bisa05g2641 894 SUPERFAMILY CAD & PB1 domains 752 837 - -
Bisa05g2641 894 Gene3D - 754 848 - -
Bisa05g2641 894 Gene3D - 126 229 IPR015300 -
Bisa05g2641 894 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Bisa05g2641 894 MobiDBLite consensus disorder prediction 553 583 - -
Bisa05g2641 894 FunFam Auxin response factor 126 230 - -
Bisa05g2641 894 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa05g2641 894 Gene3D - 292 364 - -
Bisa05g2641 894 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Bisa05g2641 894 ProSiteProfiles PB1 domain profile. 759 843 IPR000270 GO:0005515
Bisa05g2641 894 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 849 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa05g2641 894 FunFam Auxin response factor 754 848 - -
Bisa05g2641 894 Pfam AUX/IAA family 749 841 IPR033389 -
Bisa05g2641 894 CDD B3_DNA 127 228 IPR003340 GO:0003677
Bisa05g2641 894 MobiDBLite consensus disorder prediction 466 487 - -
Bisa05g2641 894 SMART B3_2 128 230 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2641 Bisa-ChrBisa05 63071694 63082383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2641 1 471 B3 DNA Binding Superfamily AT1G30330 86.345 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa05g2641 AUX_IAA 4.5e-09 CL0072