Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2632 ATGAACAATAGTGTTGCTCCTTGCAATTTTCAGAGTACTAACAGTCTCACCAATCAAAAGAATCTCATAGGGCCAGACCAAGAACTTGTAGAGCTTCTATGGCAGAATGGACAGGTGGTTTTGCACAGCCAAACACATAGGAAACCAGCTTTGAATTCTGTAGACTTAAGACAGGTTCAGAACAATGATCAATCAACATTGGCTTACGGGTCACACGGGAATTCAAGTAATTTGTTTCAAGAAGATGAGACAGTCTCATGGATCCAGTACCCACTTGAAGATCCATTGGAACAAGAGTTATGTTCAAACATGTTCCCTGATCTTCCATCCTGTGAAGTTGAGCCTGATAAAGCAATCAAGCAATTTCAAGACGAAAAGTTTGCCAAATTCAATGCCTACAGTGCTCCTCATGTGGCTGCAGGTGTTCAGCAATTATCAGAAAATCCTATGCCTTCTCCAAGATTTCAGTTTCCTGATTCATCTCAGAGAATCATTGATTTCAGTAAATCACAAAATGTGCTCAATTATTATCACTTTTCAGCAATCCCCAATATTGCTTCGACATCTTCTAATGCACAACTTGGAGGGAAAGGCACGAGTAATATGTCGCAAAAGGAGGCTAAAGAGAGCTCAGTTGTGACAGTTGGTTCGAGTCATTGTGGCAGTAATCAAATTCCTCGAGATGGAGATGTGAGCAGGATATCAAGCAATGGTATTTGGAATACCAGTATGTCAGCTGAGCCGGAACACTTTAGGGAAGATGTTCAGGGAGCAATTCCAAAGGGTGAGAAGGGGAAATTGGAAACACATGAACCAACTGTCACTTCATCTTCGGGTGGCTCGGGCAGCAGCCTTGAAAAAACTTGTAGCCAATCTACTCAGATCAGTAGCCAGAAAAGAAAAGGGACGGATATAGAAGAATTAGAGGAGCAAAGTGAGGCCATAGAACCCAAACCGGCTTCTCAAAAAAAGGAAGCTCTGCGGAAAGGGACTTCCCGAAAAAACCGTGCTGCTGAAGTGCACAATCTCTCAGAAAGAAGACGTAGAGACAGGATCAACGAGAGGATGAGGACATTGCAACAACTCATACCTCATAGCAACAAGACAGACAAAGCATCGATGCTAGATGAGGCGATAGAATATTTGAAATCACTTCAGTTTCAGCTTCAGGTACTGTGGATGGGAGGTGGCATGACACCGGTGATGTTTCCGGGAATTCAGCACTATATGTCCCAAATGGGTATGGGAATGGCTTCATCTTCTTTGCCTCCTATTCACAATCATATGAGCATACCAAGAATACCATTTGAGCAATCCTTATCTATGGCACAGACACCGAGTCAGACCGTAACATTCCAACCTCCTGTTTTGGGTCCCTTTAATTACCAAAATCAGATGCAAAATCCAGCTCTTTCAGAGCAATATGCACGTTGCATGGGCTATCATCTTATGCAAAGTGCCTCTCAGCCAATGAATGCATTCAGATATGGTTCCCAGGCAGTACAACATAGTCAAACAATGATTGCACCCAGCAGTAGCAATGGACCCCCAAGTGGAGTAGCGAAAACCAATGATTCTGTGGGTGGCAAGATGGGTTAA 1599 0.4328 MNNSVAPCNFQSTNSLTNQKNLIGPDQELVELLWQNGQVVLHSQTHRKPALNSVDLRQVQNNDQSTLAYGSHGNSSNLFQEDETVSWIQYPLEDPLEQELCSNMFPDLPSCEVEPDKAIKQFQDEKFAKFNAYSAPHVAAGVQQLSENPMPSPRFQFPDSSQRIIDFSKSQNVLNYYHFSAIPNIASTSSNAQLGGKGTSNMSQKEAKESSVVTVGSSHCGSNQIPRDGDVSRISSNGIWNTSMSAEPEHFREDVQGAIPKGEKGKLETHEPTVTSSSGGSGSSLEKTCSQSTQISSQKRKGTDIEELEEQSEAIEPKPASQKKEALRKGTSRKNRAAEVHNLSERRRRDRINERMRTLQQLIPHSNKTDKASMLDEAIEYLKSLQFQLQVLWMGGGMTPVMFPGIQHYMSQMGMGMASSSLPPIHNHMSIPRIPFEQSLSMAQTPSQTVTFQPPVLGPFNYQNQMQNPALSEQYARCMGYHLMQSASQPMNAFRYGSQAVQHSQTMIAPSSSNGPPSGVAKTNDSVGGKMG 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2632 532 Gene3D - 331 392 IPR036638 GO:0046983
Bisa05g2632 532 PANTHER TRANSCRIPTION FACTOR PIF3 12 507 IPR044273 GO:0003700|GO:0006355
Bisa05g2632 532 CDD bHLH_AtPIF_like 336 399 IPR047265 -
Bisa05g2632 532 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 333 397 IPR036638 GO:0046983
Bisa05g2632 532 MobiDBLite consensus disorder prediction 300 351 - -
Bisa05g2632 532 MobiDBLite consensus disorder prediction 504 521 - -
Bisa05g2632 532 SMART finulus 342 391 IPR011598 GO:0046983
Bisa05g2632 532 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 336 385 IPR011598 GO:0046983
Bisa05g2632 532 FunFam Basic helix-loop-helix transcription factor 331 394 - -
Bisa05g2632 532 MobiDBLite consensus disorder prediction 271 299 - -
Bisa05g2632 532 MobiDBLite consensus disorder prediction 259 351 - -
Bisa05g2632 532 MobiDBLite consensus disorder prediction 504 532 - -
Bisa05g2632 532 Pfam Helix-loop-helix DNA-binding domain 340 386 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2632 Bisa-ChrBisa05 62847400 62850593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2632 25 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 34.507 1.31e-40 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa05g2632 HLH 1.8e-14 No_clan