Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2624 ATGACATCTTTATCCATTTCCCCTACCCCCATGAATTCCATCCCTCTAAATTCAAAGCCCCCCAATGCACCTTCCTCCATCAAACCACAACATTCACACGTATTCACTTACCTCGCTTCAAAGCCCAGTCGGCCTTCACAACACAACCTCTTTTCTAGTTTCTTGCAACTTTCATCAATGGTGGCCAAGAGGCTATGGGCATCGACCGCGGCACCACCTACAGCTGGCAAAGAAAAGCAGTTTGCCCCTGAGGTGATTCCTTCGATGGTTCTCATGAAAATGAAGAAGGTTGCTGAAGCGTTTTTGGGTCAGACCATGAAGAATGCTTTGATCTCTGTGCCGGCTTATTTCAACTATTCACAGGGGCAAGCTATGATCCATGAAAGATGCAGGGGCTGTTGCCGGGCTTCATGTGATGAGAATTATCAATCAACCTATTATTGCTGCTATAGCCTAGGGTTTGGACAAGAAGGCTTCGATAACTGGAGAGAAGAATGTTGTAAGAAAGGCCAAAATAATGGGAATTCATCAGCGAGGGAGACAAGAGCACTGGTGGTAGACGACGACATGCTCATAAGAAAGATCCATGAAAAGCTATTGAACAGTATTGGGGTGAAGAAGCTTGAGGTTGTGAGAAATGGGAAAGAAGCCATTGATATTCACAATTTAGGCTGGGCTTTTGACCTAATTCTCATGGACATGGACACGCCCATTATGAATGGCATCGAGGCAACAAGGAGGCTTCGGTCAATGGGGATTCAAAGCAAGATTGCAGGAATATCGGCACGCAGTGTGGAAGCTCAAATAACAGAGTTCGTGGAAGCAGGCCTTGATCTCTACCATGAGAAACCTTTGACCTCTACTGAGCTTTCTTCTATTCTCCACGATATCAACCATAATTAA 903 0.4529 MTSLSISPTPMNSIPLNSKPPNAPSSIKPQHSHVFTYLASKPSRPSQHNLFSSFLQLSSMVAKRLWASTAAPPTAGKEKQFAPEVIPSMVLMKMKKVAEAFLGQTMKNALISVPAYFNYSQGQAMIHERCRGCCRASCDENYQSTYYCCYSLGFGQEGFDNWREECCKKGQNNGNSSARETRALVVDDDMLIRKIHEKLLNSIGVKKLEVVRNGKEAIDIHNLGWAFDLILMDMDTPIMNGIEATRRLRSMGIQSKIAGISARSVEAQITEFVEAGLDLYHEKPLTSTELSSILHDINHN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2624 300 PANTHER TWO-COMPONENT RESPONSE REGULATOR 171 298 - -
Bisa05g2624 300 Pfam Response regulator receiver domain 184 293 IPR001789 GO:0000160
Bisa05g2624 300 Pfam Hsp70 protein 77 125 IPR013126 GO:0005524|GO:0140662
Bisa05g2624 300 MobiDBLite consensus disorder prediction 1 27 - -
Bisa05g2624 300 CDD REC_hyHK_CKI1_RcsC-like 184 294 - -
Bisa05g2624 300 FunFam heat shock 70 kDa protein-like 62 130 - -
Bisa05g2624 300 Gene3D - 37 129 - -
Bisa05g2624 300 Gene3D - 160 300 - -
Bisa05g2624 300 SUPERFAMILY Actin-like ATPase domain 70 126 IPR043129 -
Bisa05g2624 300 SMART REC_2 181 294 IPR001789 GO:0000160
Bisa05g2624 300 SUPERFAMILY CheY-like 180 296 IPR011006 -
Bisa05g2624 300 ProSiteProfiles Response regulatory domain profile. 182 298 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2624 Bisa-ChrBisa05 62716865 62731249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2624 183 290 Response Regulator Gene Family AT3G04280 41.818 6.14e-19 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa05g2624 Response_reg 7.2e-18 CL0304