Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2581 ATGGGTTACCTCACGTCCTCCGTTCTTCTGCCAAAGTTCACTGCAGCGCTTCCGTCCAAGACAGGGACCTCCGACGGTCGTCCGTATGCTGCCAGCCTGAAGCTTACTAATGCTGACCGAGAGAGGCGAATCGGGGCGCTGAAAGGGCGCCACAGAGTGGCTGCTTGGACCAAAATCGAAGGTACACTCCTCGGCAGTTGCTACTTCTCTCAGCCTCTGTCGTCTCAAATGGTTTCCTTCAGGTTTCATCAGTACCAGGTGGTGGGAAGAGCTCTTCCCACTGAATCCGATGAGCATCCCAAGATCTACCGGATGAAGCTTTGGGCCACCAACGAGGTCCGTGCCAAGTCCAAATTCTGGTATTTCTTGAGAAAGCTGAAGAAGGTCAAGAAGAGCAATGGCCAAGTGCTAGCCATCAACGAGATTTTTGAGAAAAATCCTACCAAGATTAAGAACTATGGAATTTGGCTGCGTTATCAGAGTCGAACTGGCTATCACAACATGTACAAGGAATACCGAGATACCACTCTCAATGGTGCCGTTGAACAAATGTACACTGAAATGGCGTCGCGTCATCGAGTGAGGTTTCCATGCATCCAGATCATTAAGACTGCCACCATCCCGGCAAAGCTGTGCAAAAGGGAGAGCACCAAGCAGTTCCACAACTCTAAAATAAAGTTTCCATTGGTGTTCAGGAAGGTTAGACCACCAAGTAGGAAGCTGAAGACAACATACAAGGCATCCAGGCCCAACTTGTTTATGTGA 765 0.4941 MGYLTSSVLLPKFTAALPSKTGTSDGRPYAASLKLTNADRERRIGALKGRHRVAAWTKIEGTLLGSCYFSQPLSSQMVSFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASRPNLFM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2581 254 FunFam 60S ribosomal protein L18a 77 147 - -
Bisa05g2581 254 FunFam 60S ribosomal protein L18a 148 223 - -
Bisa05g2581 254 SUPERFAMILY RplX-like 147 222 - -
Bisa05g2581 254 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 83 204 IPR023573 GO:0003735|GO:0005840|GO:0006412
Bisa05g2581 254 PANTHER 60S RIBOSOMAL PROTEIN L18A 79 253 IPR028877 -
Bisa05g2581 254 Gene3D - 148 223 - -
Bisa05g2581 254 Gene3D - 73 147 - -
Bisa05g2581 254 Hamap 50S ribosomal protein L18Ae [rpl18a]. 82 145 IPR028877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2581 Bisa-ChrBisa05 61680372 61695042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2581 76 254 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 92.737 1.29e-125 353