Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2560 ATGGGGAGTGAGAGCACGGGCGGGATTGGTGAACGAGGGAGGGAAATGGCGCAGGGGATGCCGGCGGCAACGAGGAAGGTGGTTCAGAGCTTGAAGGAGATCGTCAACTGCACGGACTGTACGGACCAGGAGATCTATGCCGTGCTTGAAGAATGTGATATGGACCCGGACCGTGCAGTTGAGAGGCTTCTTGCCCAAGATACTTTTCGGGAGGTGAAAAGCAAACGTGAAAGAAGGAAAGAGGCATTAGACTCAAGGCCTAGGCGTAGTAATGTCGGTTTCAGTCGGGGAGGCAAAACTGGTAGTGAGCGAAATGTTGTGCACAGTGGATCAACACATGTGACTTACAATGAACTAGGTAAAGCCACAACCAAGGGAGAGATTGGGTCACTTTGGCCTTCAGTTTCATCTTCCATGACACATGTGATAGGGAAAGATACGGCTAGAGATAACAGACAACAATCAGGATCTGCTGGAGTTTCTCCAGGACTTAAACCCACTATTCTAGGAGTGAGCAAAAGACATCTTTCAATGGCAGACATTGTAAGAATGGGTAAGCCTTCTCAGGATGCCGTTTCATGTTACCATTCCAAAGCCTCAGGAGTTTCTGTATCTGCAAATCCAGAGCCAAGTCTAAGCCTGCACAATCACAATCAATCTTGCCAGCAAGTTTTTAATCACGAATGGCCTGTAATTGAGAACCCAGTGTCTGGCAATGATTCCCATGCTTCAAAGTTGTCTGCTTTATCAAACGCTAACATTCTACCTGATCATGTTGGCCTGCAAAGTAATTCAGATAGTTTGCTCGGGAACAGTGTATCAGAAGAAGCCCAAGTTTCACAGGGGAATGCTGCTAGTGAGAATGTTAATTCTGACAAAATTGAATCTAGTTCCCTATCTTGCCGACATACTATTGTGAAAAATGCTGGACTAACATCTCATTCCAACTATAACTTAAAGAACACTGGTGGCACTGATTCTCATAGTTCTTCTGACCATAACGAAGATGTGTCGTCAGCTGCATCAGATTTCCAGAGGTTAAGCTTGAGAGACTCCAAGCTGGAACTTCTGTCTACAGGAGATGGCTCTACTTTGGTTCTTCCAGATCATGTACCAGACTTGACTGCTAAATGCTCGCATTTGAGTTTTGGTATATATAATGGTGGCAATAATTCAACATCTTCTGCGATGCTTGCATCTCATCTTTCAAGTGGCTTGGAAGAGAAGGCCGCAGCTGTAGATGGTGACCGTGGTGATCAACAACTTGGGCATGATGCTTTTAAAGAAGCAGCCATTGATAAAAATTATGACTTCCTTTCGTCTTGTCGGCAAGAGCTTATGAGGTGTACATTTCCTGAGGCAACTCTTGGCCATGAATATGTCACCATGTCATCTGTTCCCAATCCTAGTTTTCAAAAATCTCAGTGGGTGACTCCTCCACTGCCTTTTAAGAGGCCAGACTTGCAGAATGGACACATGTCTACTTGTTCAAGGGAAATGGGACTTGCAACAAAGGACAGGCTTTCTGATGGAGTGACAAGCTGTCTGGATCGCTGCACAACTCATGATTGTGCTTTGTGGCATGATGGGAATGGGCTTATTTTGGAGGGAAAAGATTTTGTTATGGAATCCCATTTTGCTCTGCCTCACAGATCTGCACTGCTCCAGGATCTTACAGTGCAATCATCACACTTGGAACAATTAGCTGATAAAAGAGGTTATCATCCCCTTCCTCAGAACCATGGGTATATGGCGTCTGTGGATGCACAGAAAGCATTTTCAGGCAGAGATGCATTTGCTTATGGAAATCCTGGTTCTTCTTCCTATAATCCTGGAAGCTTTTTGCCTAATTCTTCTCTTGGCTCTATGATGCCTTCAAGTAACTTTGATGAGATTTTACCATCTCAATATAATGGTGGGCGTAACCTAAGCTTGATTCAACAGAAAGCTCTACTTAGGCTTCCTTCAAGGAGAAGGGGAAAAATTTGCAAGAGGCAATATTTCCAAGTATCTTTATGTCTGGATCAGAAGCAAGAACATGACATCGATGTTTCACTAAAGTCCTCCGAAGTCCCAAGAGTAGTTTCACATGTTTCATTTGCAGCCGATGGGGAAACTAATCGACGACCCAAAGGACGGCTGGCCAGCTCCAGGAACAAGTTAAAACCTCCAATTATTGTGATGAGAGACAGTGCTAATGCACTCAAAGCTCATGCCATGGAGGTGAGTTCAGGACCTATTGTTATCATGGCTGCATCGTTCATGAGCGCTGCTCTTGATCACCTTCCATTAGATGACAACGATGAAACTGCTGCTGCAATGCAGAACCAGCACTACCAGAATGGTCGAACCCATCATCATAATCTTGATGTCTCAAATTCCTATGGAGTGCCCTATAACTTGCTCCCAAATGTTACAATCCCCCGAGACATACTCTTGGGTTCCACCAGGGCCAAACTTTTCAAAAACCTGAAACTTTGGTACTTCTCGTCTTCAAAAACTTACAGTAGTTTTCGCGTTGCTAAACATGAGATGCTCTATGCTGATGTAGAAACACGCAATTTTACTAATTAA 2574 0.4433 MGSESTGGIGERGREMAQGMPAATRKVVQSLKEIVNCTDCTDQEIYAVLEECDMDPDRAVERLLAQDTFREVKSKRERRKEALDSRPRRSNVGFSRGGKTGSERNVVHSGSTHVTYNELGKATTKGEIGSLWPSVSSSMTHVIGKDTARDNRQQSGSAGVSPGLKPTILGVSKRHLSMADIVRMGKPSQDAVSCYHSKASGVSVSANPEPSLSLHNHNQSCQQVFNHEWPVIENPVSGNDSHASKLSALSNANILPDHVGLQSNSDSLLGNSVSEEAQVSQGNAASENVNSDKIESSSLSCRHTIVKNAGLTSHSNYNLKNTGGTDSHSSSDHNEDVSSAASDFQRLSLRDSKLELLSTGDGSTLVLPDHVPDLTAKCSHLSFGIYNGGNNSTSSAMLASHLSSGLEEKAAAVDGDRGDQQLGHDAFKEAAIDKNYDFLSSCRQELMRCTFPEATLGHEYVTMSSVPNPSFQKSQWVTPPLPFKRPDLQNGHMSTCSREMGLATKDRLSDGVTSCLDRCTTHDCALWHDGNGLILEGKDFVMESHFALPHRSALLQDLTVQSSHLEQLADKRGYHPLPQNHGYMASVDAQKAFSGRDAFAYGNPGSSSYNPGSFLPNSSLGSMMPSSNFDEILPSQYNGGRNLSLIQQKALLRLPSRRRGKICKRQYFQVSLCLDQKQEHDIDVSLKSSEVPRVVSHVSFAADGETNRRPKGRLASSRNKLKPPIIVMRDSANALKAHAMEVSSGPIVIMAASFMSAALDHLPLDDNDETAAAMQNQHYQNGRTHHHNLDVSNSYGVPYNLLPNVTIPRDILLGSTRAKLFKNLKLWYFSSSKTYSSFRVAKHEMLYADVETRNFTN 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2560 857 MobiDBLite consensus disorder prediction 1 21 - -
Bisa05g2560 857 PANTHER RNA POLYMERASE II DEGRADATION FACTOR-LIKE PROTEIN (DUF1296) 1 503 - -
Bisa05g2560 857 MobiDBLite consensus disorder prediction 313 339 - -
Bisa05g2560 857 MobiDBLite consensus disorder prediction 95 109 - -
Bisa05g2560 857 MobiDBLite consensus disorder prediction 147 161 - -
Bisa05g2560 857 MobiDBLite consensus disorder prediction 72 109 - -
Bisa05g2560 857 MobiDBLite consensus disorder prediction 147 167 - -
Bisa05g2560 857 MobiDBLite consensus disorder prediction 72 87 - -
Bisa05g2560 857 MobiDBLite consensus disorder prediction 273 293 - -
Bisa05g2560 857 Pfam GBF-interacting protein 1 N-terminal 21 81 IPR009719 -
Bisa05g2560 857 SUPERFAMILY UBA-like 21 82 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2560 Bisa-ChrBisa05 61020766 61028995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2560 742 804 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 51.562 8.31e-12 64.7