Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2557 ATGCAGCAAGATCACCGAAAAAAGAATTCAACGGAGATGGAATTTTTCTCCGAATATGGTGATGCCAACCGGTATAAAATTCAAGAAGTCATCGGGAGAGGAAGTTATGGTATTGTCTGTTCAGCAGTTGACAGTCATACTGGAGAAAAAGTGGCAATAAAAAAGATACATGACATATTCGAGCACATATCTGATGCTGCACGTATTCTTCGTGAGATAAAGTTGCTTAGACTTCTACGACATCCTGATATTGTTGAAATCAAACACATTATGCTTCCTCCTTCTAGGAAGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGCAGTCCGATCTTCATCAAGTCATTAAAGCCAATGATGACTTAACTAAAGAGCACTATCAGTTCTTCCTTTACCAGCTACTGCGAGCATTGAAGTATATGCACACTGCAAATGTTTATCATCGAGATTTGAAACCAAAGAATATACTGGCCAATGCGAACTGTAAACTTAAAATCTGTGATTTTGGATTAGCTAGAGTTGCCTTTACTGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACCAGGTGGTATAGAGCTCCAGAGCTATGCGGGTCATTTTACTCAAAGTATACACCTGCAATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTATTAACTGGAAAGCCACTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACTGATCTTCTTGGTACACCCTCACTGGATACTATATCCCGGGTACGTAATGATAAGGCAAGGAGATACCTAACTAGCATGAGGAAAAAACAGCCTATTCCATTTGCCCAAAAATTTCCTAATGCAGATCCTTTAGCACTAAAATTACTGGAAAGGTTGCTTGCTTTTGATCCAAAAGATAGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTTAAGGCGATGGCAAAAGTGGAGAGGGAACCATCCTGCCAGCCTATCTCAAAGATGGAGTTTGAATTTGAAAGGCGAAGGGTCACAAAGGAAGAAATTCGAGAGCTGATCTTCCGGGAGATTTTAGAGTATCATCCTCAATTATTGAAAGACTACATGAATGGAACCGAGAAAATTAATTTTCTTTATCCAAGCGCTGTTGAGCACTTCAGGAAGCAGTTTGCACATCTTGAGGAAAATGGTAGTAAAAATGGGCCTGTTATGCCACTTGAAAGAAAGCACGTTTCTCTTCCAAGGTCAACTGTTGTACATTCAAATATGGTACCCCAAAAAGAGCAATCAAATACTGCTTCCTGCAAAAACCGACCAACTGCTGAGGAATGTAATAACTCCATGAATACAGGAATTGCCGTGTCAAGGTCCATGCAGGGACCGCAAAGAATTCCGCTGGCAAGACCTGGTAAATTTGTCGGGCCAGTTGTTCCATGCGAGTATGGAAGTGTTACGAAGGATTCTTATGATCCAAGGACATTCATCCGAGGTGCCGGGCCTCCTCAAGCCATTGCCCCCGCATATCATTACCAAAGACCCAGCTCAGGAAATCAAGAGAGTTCAGCAACAGATACTTCAAAGGTTGTGTCAGTACCGGTCAAACATGTCCAGCAATGTGGAGTTAATGCCAAAGTAGCACCCGATATAGCTATTAATATTGATACAAACCCATTTTTTATGACACGGGCAGGAGTGAACAAGATTGGACCGGATGATCAAATAGCTATCGACACAAACTTTCTGCAGTCAACTGCTCACTATGGTGGGATTGGTGGGGGTGCTGATGCTGTGACCACAACTCATAGAAAGGTCGGGCCGGTTCAGTGTGGTATGGCACGGATGTTCTAG 1845 0.419 MQQDHRKKNSTEMEFFSEYGDANRYKIQEVIGRGSYGIVCSAVDSHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMQSDLHQVIKANDDLTKEHYQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFTDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALKLLERLLAFDPKDRPTAEEALADPYFKAMAKVEREPSCQPISKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTEKINFLYPSAVEHFRKQFAHLEENGSKNGPVMPLERKHVSLPRSTVVHSNMVPQKEQSNTASCKNRPTAEECNNSMNTGIAVSRSMQGPQRIPLARPGKFVGPVVPCEYGSVTKDSYDPRTFIRGAGPPQAIAPAYHYQRPSSGNQESSATDTSKVVSVPVKHVQQCGVNAKVAPDIAINIDTNPFFMTRAGVNKIGPDDQIAIDTNFLQSTAHYGGIGGGADAVTTTHRKVGPVQCGMARMF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2557 614 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2557 614 FunFam Mitogen-activated protein kinase 111 339 - -
Bisa05g2557 614 SUPERFAMILY Protein kinase-like (PK-like) 21 319 IPR011009 -
Bisa05g2557 614 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Bisa05g2557 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 363 - -
Bisa05g2557 614 CDD STKc_TDY_MAPK 24 361 - -
Bisa05g2557 614 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Bisa05g2557 614 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2557 614 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bisa05g2557 614 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Bisa05g2557 614 FunFam Mitogen-activated protein kinase 15 118 - -
Bisa05g2557 614 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2557 Bisa-ChrBisa05 60963950 60970642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2557 1 445 MAP Kinase Gene Family AT2G42880 86.067 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bisa05g2557 Pkinase 1.7e-67 CL0016