Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2551 ATGGCTGTGGCGAATCAAGCGCCTCCACCGTCTACGACCACGGAAAGGGTCAGCTCCAAAGCAGCGGAACAAGCGGTGAAATCCCTCCTGAAATGGAGAAATTCCAAGTCTCAGGACGAAAAGCCCAAGCTATTTGATCAAGAAGATGAATTCTTCTACCTCGTTCTCACCCTCAAGAAAATCCCTCATCAGGATCGCGTTAATCCGTATAAAATCCCTCTCCCACATTCTCTTCTCTCCGAATTCTCTGAGCTCTGTTTGATCATCGATGACAGGCCCAAGTCGAGTCTCACCAAGGACGAGGCGCAGAAGAAGGTCAAATCGGAGAACATACCCGTTTCGAAGGTCTTGAAGCTCTCGAAGCTCAAGTCCAGTTACCGTCCGTTTGAGGCGAAGCGGAAGCTTTGTGACTCTTACAACATGTTCTTCGCTGATAAGAGGGTGATTCCGCTGTTGCCGAAGCTATTGGGTAAGCATTTCTTTAAGAAAAAGAAGATTCCCGTGCTGTTGGATTTGAAGCATAACAATTGGAAGGAGCAGATTGAGAAGGCGTGCTCTTCGGCGTTGTTGTTTTTGGGGACGGGTACGTGTAGTGTGGTGAGAGTAGCCAAGGTGTCAATGGAAAAGGATGAGATTGTTGAGAATGTGATTGCTGCTATTAATGGCATTGCAGAGGTTGTGCCCAAAAAATGGAGGAATGTGAGGTCGATTCACTTGAAGTTGTTGGAGTCGCTTGCGTTGCCCATATATCATACAGTTCCTGATATGAAATTGAAGATTGAGGGAATTAGAGATAGTAAAGATGGGGTGATGGAGAAGGTGGTAGAAAGTAAGAAGGACCAGAAAGCGAGCAAGAAGAAGGGGAGGATTCATGAAGTTATGTACATGGATTCTAATATCAGTGAGGAACTCAAGGAAGGTGATGATTTGGGTAGTGAGGATGATGCAAAAATTGAGAAGGAAGATAGTGAGAATAAAGAAATGGCTAGTGGAAAATTGGTGGATAAAAGGAGAACGAAAGCTAGGGACAAGCAAAACAAAAATGAATTATCTATGGCTTACGCAGAGTCTGGCAAAAAGAAGAGAAGTCTACAAGTTAAGTCAGAAGGTAGAGATATGGAAGTAAAAGCCAAGAAAACTAAGAAGGCTGCATAA 1155 0.4433 MAVANQAPPPSTTTERVSSKAAEQAVKSLLKWRNSKSQDEKPKLFDQEDEFFYLVLTLKKIPHQDRVNPYKIPLPHSLLSEFSELCLIIDDRPKSSLTKDEAQKKVKSENIPVSKVLKLSKLKSSYRPFEAKRKLCDSYNMFFADKRVIPLLPKLLGKHFFKKKKIPVLLDLKHNNWKEQIEKACSSALLFLGTGTCSVVRVAKVSMEKDEIVENVIAAINGIAEVVPKKWRNVRSIHLKLLESLALPIYHTVPDMKLKIEGIRDSKDGVMEKVVESKKDQKASKKKGRIHEVMYMDSNISEELKEGDDLGSEDDAKIEKEDSENKEMASGKLVDKRRTKARDKQNKNELSMAYAESGKKKRSLQVKSEGRDMEVKAKKTKKAA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2551 384 Pfam Ribosomal protein L1p/L10e family 38 244 IPR028364 -
Bisa05g2551 384 CDD Ribosomal_L1 22 249 IPR028364 -
Bisa05g2551 384 MobiDBLite consensus disorder prediction 1 20 - -
Bisa05g2551 384 FunFam Ribosomal protein L1p/L10e family 95 186 - -
Bisa05g2551 384 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 25 244 - -
Bisa05g2551 384 SUPERFAMILY Ribosomal protein L1 41 250 IPR023674 -
Bisa05g2551 384 Gene3D - 95 187 IPR016095 -
Bisa05g2551 384 Gene3D - 192 246 - -
Bisa05g2551 384 MobiDBLite consensus disorder prediction 297 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2551 Bisa-ChrBisa05 60879853 60881007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2551 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 30.097 4.25e-10 57.4