Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2536 ATGCAAACTGAAAATTCTGATGTTTCAAAAGCTGAAGATTTCAAACTCCTAGCCAACCAAGCATTCAATGCTCGCAAATATGGCCAAGCTATTGATTTATATACAAAAGCAATTGAACTAAACAATCGAAATGCTGTATACTGGGCTAATCGTGCCTTTGCCCATCTTAGGCTTGAGGAATATGGTAGTGCAATACAAGATGCTACAAGGGCTATCGAAGTTGATCCTAAATATTCAAAGGGCTATTACAGGCGAGGTGCTGCTCATCTTGCCATGGGAAAATTCAAGGAAGCACTGAAGGATTTTCAGCAGGCATATCAAGTGTTGATGGAATTAATAAAGGTTTGTTTCAGTATTAAGAAGGTGAAGCTGAAAGATTTCAGTACAGATGGTCTTAGTTCTGATACGAGTCTTTGTCATGTGCTTTTGTTATCTGTTTCATCAGAACCTTTTTATAGCCAGCTTGTCAAGAAAATGTGCCCAAATGATCCTGATGCAATAAAGAAATTAAAGGAATGTGAAAAAGCAGTTATGAAACTTAAATTTGAAGAAGCAATTGCTGCACCAGATATTGAAAGGCATTCAATAGCTGAATCCATAGATTTCCATTCTATAGGAAATGGCCACATTGCTTTGGTGCTCACTGAAGTGGCCATAGCATTTATGGCAGCATTGGTGATGTTGTTCAGGGAATCAGTGACAACGACTGTAAATGCTGTTGTGGTCGGTCTGCTGTGGCTCTTTGGGGCATATTGGTATGCTTTCCAAATTGTATTGCAAACGAGAGAGATGTTGCAAGCCTTGCCTTCTCTTGTTGATATAAATGTTCCTAATGGCAAACATTTCACTGTTTGTGGTGATGTGCATGGTCAGGGGAAGTCTTGTAAATTAAAATTAGGATCACTTCTCAAGTTTCTTGGCAATGCTTTGGATAGTGTTGCTATGTACTATGATCTCTTAAATATCTTTGAGCTTAATGGGCTTCCCTCGGAAGAGAATCCATACCTTTTCAATGGTGACTTTGTGGATAGAGGATCCTTCTCTCTGGAAGTCATTCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCCATATATCTAGCTAGAGGGAATCATGAGAGCAAGGGCATGAACAAGATATATGGTTTTGAGGGTGAGGTCCGCTCAAAGTTAAACGACACATTTGTGGAACTATTTGCAGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAATGAGAAGGTTTTTGTGGTTCACGGAGGTCTTTTTAGTGTTGATGGGGTTAAGCTCTCTGACATTAGAGCACTTAACCGGTTTTGTGAGCCTCCAGAAGAAGGATTGATGTGTGAATTGCTATGGAGTGATCCACAACCTCTCCCTGGACGGGGCCCAAGCAAGCGTGGTGTGGGTCTTTCTTTCGGTGCAGATGTGACGAAAAGGTTTTTGCAGGACAATAATTTAGATTTAGTTGTGAGATCTCATGAAGTAAAGGATGAGGGTTATGAGGTTGAACATGATGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGACCAGATGGGTAACAAGGGTGCCTTTATTCGATTTGAAGCACCTGATTTGAAGCCAAACATTGTTACTTTCTCAGCGGTGCCTCACCCCGATGTGAAGCCAATGGCTTATGCAAACAACTTTCTCCAATCCCCCAATCCCCATCTTCACCATCGTGAAGCAGAGTCCGTGATGAAGATTCTGAAAGTGCTGCGGCCAAAAACCTGTCTCGCACAATTGGATCTGTAG 1791 0.4104 MQTENSDVSKAEDFKLLANQAFNARKYGQAIDLYTKAIELNNRNAVYWANRAFAHLRLEEYGSAIQDATRAIEVDPKYSKGYYRRGAAHLAMGKFKEALKDFQQAYQVLMELIKVCFSIKKVKLKDFSTDGLSSDTSLCHVLLLSVSSEPFYSQLVKKMCPNDPDAIKKLKECEKAVMKLKFEEAIAAPDIERHSIAESIDFHSIGNGHIALVLTEVAIAFMAALVMLFRESVTTTVNAVVVGLLWLFGAYWYAFQIVLQTREMLQALPSLVDINVPNGKHFTVCGDVHGQGKSCKLKLGSLLKFLGNALDSVAMYYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKGMNKIYGFEGEVRSKLNDTFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSDIRALNRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGADVTKRFLQDNNLDLVVRSHEVKDEGYEVEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNIVTFSAVPHPDVKPMAYANNFLQSPNPHLHHREAESVMKILKVLRPKTCLAQLDL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2536 596 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Bisa05g2536 596 PRINTS Serine/threonine phosphatase family signature 305 332 IPR006186 GO:0016787
Bisa05g2536 596 PRINTS Serine/threonine phosphatase family signature 402 428 IPR006186 GO:0016787
Bisa05g2536 596 PRINTS Serine/threonine phosphatase family signature 368 392 IPR006186 GO:0016787
Bisa05g2536 596 PRINTS Serine/threonine phosphatase family signature 432 459 IPR006186 GO:0016787
Bisa05g2536 596 PRINTS Serine/threonine phosphatase family signature 335 362 IPR006186 GO:0016787
Bisa05g2536 596 PRINTS Serine/threonine phosphatase family signature 488 508 IPR006186 GO:0016787
Bisa05g2536 596 PRINTS Serine/threonine phosphatase family signature 510 526 IPR006186 GO:0016787
Bisa05g2536 596 Gene3D Tetratricopeptide repeat domain 2 205 IPR011990 GO:0005515
Bisa05g2536 596 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Bisa05g2536 596 CDD MPP_PP5_C 253 560 IPR041753 -
Bisa05g2536 596 SUPERFAMILY Metallo-dependent phosphatases 253 563 IPR029052 -
Bisa05g2536 596 PIRSF PPPtase_5 305 567 - -
Bisa05g2536 596 PIRSF PPPtase_5 1 125 - -
Bisa05g2536 596 PIRSF PPPtase_5 136 295 - -
Bisa05g2536 596 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Bisa05g2536 596 Pfam Tetratricopeptide repeat 47 77 IPR019734 GO:0005515
Bisa05g2536 596 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 43 580 - -
Bisa05g2536 596 Gene3D - 250 565 IPR029052 -
Bisa05g2536 596 SMART tpr_5 45 78 IPR019734 GO:0005515
Bisa05g2536 596 SMART tpr_5 11 44 IPR019734 GO:0005515
Bisa05g2536 596 SMART tpr_5 79 112 IPR019734 GO:0005515
Bisa05g2536 596 Pfam Tetratricopeptide repeat 80 105 IPR001440 GO:0005515
Bisa05g2536 596 Pfam Calcineurin-like phosphoesterase 281 499 IPR004843 GO:0016787
Bisa05g2536 596 SUPERFAMILY TPR-like 7 187 IPR011990 GO:0005515
Bisa05g2536 596 SMART pp2a_7 253 549 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2536 Bisa-ChrBisa05 60447314 60457669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2536 256 494 Calmodulin-binding Proteins AT5G63870 31.022 8.92e-33 126