Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2522 ATGGAATCGTCCATTGCCATTTTCAGACTAAAACTCGTTGCAAACGCAAAGCTTGTGATTGTATTTTTGTTTGTCTTGAGTAGCTTGGAGCTTCGACTCAGACTAAAGAGGGGCATTTCCGGCAGCAATTCATCATCCCGCGCCTCTTCCCTCTTCCCGGTTGCAGCTTCGATGTCACCGTCGTCCGTCGTAGAGGTCTGGCTGATCGCTGTGTTCCTGCTGGTGAAGCTGATTCAAAGGCACTTGCTGTTGCTCAGGATATCAGTCAGAAGATTGTCAATGGGAAAGAATGAGTTTCTCACGCCAAAGGCAATTGCTAACCGAATCAAAGCAAAAGGTCTGCAGAAGCTTAGATGGTACTGCCAGATGTGCCAGAAACAATGCCGAGACGAAAATGGTTTTAAGTGCCATTGCTTGAGTGAGGGTCACCAGCGACAAATGCAAATCTTTGGGCAAAACTCAAATCGCATTATTGAGGGCTACTCTGAAGAATTTGAGAAAACGTTCCTTGAGCACATGAAGCGCAGCCACAGATTCAGTCGTGTAGCTGCTACAGTGGTGTACAATGAGTACATTAATGACAGGCACCACATTCATATGAATTCCACCCAGTGGGCTACACTAACTGAATTTGTCAAGTATCTGGGTCGGACCGGCAAGTGTAAGGTTGAAGAAACACCAAAGGGTTGGTTTATCACATACATAGATAGAGATTCAGAGACTCTCTTCAAAGAGAGGATGAAGAATAAGAGAATAAGGGCAGACATGGCAGAAGAAGAGAAGCAAGAGAAGGAGATAAGGAAACAAATTGAAAAAGCTGAGCAGTTGATGCAGCCATCTACCATTGGGTCTGATCAGTTGTTACAGGCCGAGCTTCCAAGGGAATTAAAGGTGGAAGATGGTGGAGTTAAGATTGGATTTTCTCTTGGTTCATCAGCAAAACCTGTAACAAAGGAAAAACATGGGGGACCGAAGGTAGTGTTTGATGAGGGTGAGGATGCAAGAAATGAAGAACGGTACCCTGGAGGCTCTTTGAAGAGGAAAGAGAGTGGTGGTGGAAAATCAACATTGGATGAATTGATGAGGGAGGAAGAGAAGAAAAAGGAGAAAATTAATAGGAAGGATTACTGGTTGCATGAGGGAATTGTTGTTAAGGTCATGAGCAAAGCTTTGGCCGATAAAGGGTATTACAAACAGAAAGGTGTTGTTTTAAAAGTGATGGACAAATATGTTGGGGAAATACAAATGCTTGAAAGCAAGCATGTGCTCAGAATTGATCAGGCAGAACTTGAAACTGTGATTCCCCAAATTGGGGGTCTAGTGAAGATTGTAAACGGAGCATATCGTGGGTCAGTAGCAAGATTGTTAGGGGTTGATATGGATCACTTTTGTGCAAAGGTGCAGATAGAGAAAGGTCCCTATGATGGTAGAGTACTTAAGGCAATGGAATACGAGGACATTTGTAGACTAGCCCAGTGA 1479 0.4388 MESSIAIFRLKLVANAKLVIVFLFVLSSLELRLRLKRGISGSNSSSRASSLFPVAASMSPSSVVEVWLIAVFLLVKLIQRHLLLLRISVRRLSMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCLSEGHQRQMQIFGQNSNRIIEGYSEEFEKTFLEHMKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIRADMAEEEKQEKEIRKQIEKAEQLMQPSTIGSDQLLQAELPRELKVEDGGVKIGFSLGSSAKPVTKEKHGGPKVVFDEGEDARNEERYPGGSLKRKESGGGKSTLDELMREEEKKKEKINRKDYWLHEGIVVKVMSKALADKGYYKQKGVVLKVMDKYVGEIQMLESKHVLRIDQAELETVIPQIGGLVKIVNGAYRGSVARLLGVDMDHFCAKVQIEKGPYDGRVLKAMEYEDICRLAQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2522 492 Pfam KN17 SH3-like C-terminal domain 373 426 IPR041330 -
Bisa05g2522 492 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 94 490 IPR037321 -
Bisa05g2522 492 MobiDBLite consensus disorder prediction 313 362 - -
Bisa05g2522 492 Coils Coil 354 374 - -
Bisa05g2522 492 SMART Kin17_mid_2 145 271 IPR019447 -
Bisa05g2522 492 SUPERFAMILY beta-beta-alpha zinc fingers 119 152 IPR036236 -
Bisa05g2522 492 FunFam DNA/RNA-binding protein KIN17, putative 435 491 - -
Bisa05g2522 492 MobiDBLite consensus disorder prediction 318 362 - -
Bisa05g2522 492 Coils Coil 247 276 - -
Bisa05g2522 492 FunFam DNA/RNA-binding protein kin17-like 381 434 - -
Bisa05g2522 492 Gene3D - 381 434 - -
Bisa05g2522 492 CDD KOW_KIN17 437 490 IPR041995 -
Bisa05g2522 492 Pfam Domain of Kin17 curved DNA-binding protein 145 270 IPR019447 -
Bisa05g2522 492 Gene3D - 435 491 IPR014722 -
Bisa05g2522 492 Gene3D - 153 253 IPR038254 -
Bisa05g2522 492 FunFam DNA/RNA-binding protein KIN17, putative 154 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2522 Bisa-ChrBisa05 60128526 60135196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2522 94 491 C2H2 Transcription Factor Family AT1G55460 70.874 0.0 579